RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 LINC00574Q9H8X3 128 aa8.18□□□□□ -1.1
DDX41-211ENST00000510171 FGF20Q9NP95 211 aaPredicted RBP8.18□□□□□ -1.1
DDX41-211ENST00000510171 C8orf4Q9NR00 106 aa8.18□□□□□ -1.1
DDX41-211ENST00000510171 SCOCQ9UIL1 159 aa8.18□□□□□ -1.1
DDX41-211ENST00000510171 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 HSPB6O14558 160 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 WBP4O75554 376 aaKnown RBP8.17□□□□□ -1.1
DDX41-211ENST00000510171 BAG2O95816 211 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 IL1AP01583 271 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 LIMS3P0CW19 117 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 LIMS4P0CW20 117 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 MYL12AP19105 171 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 CHATP28329 748 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 GPR12P47775 334 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 GNG10P50151 68 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 FOXE3Q13461 319 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 MED21Q13503 144 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 GPR50Q13585 617 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 EBI3Q14213 229 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 CDK5R1Q15078 307 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 DEFB136Q30KP8 78 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 RPL22L1Q6P5R6 122 aaKnown RBP8.17□□□□□ -1.1
DDX41-211ENST00000510171 MOB3BQ86TA1 216 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 TGIF2LXQ8IUE1 241 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 Q8NFD4 153 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 OR51T1Q8NGJ9 327 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 OR13A1Q8NGR1 328 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 RFESDQ8TAC1 157 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 GPR148Q8TDV2 347 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
DDX41-211ENST00000510171 ABCG5Q9H222 651 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 KIF25Q9UIL4 384 aa8.17□□□□□ -1.1
DDX41-211ENST00000510171 SIRT4Q9Y6E7 314 aaPredicted RBP8.17□□□□□ -1.1
DDX41-211ENST00000510171 NPIPB11E5RHQ5 1161 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 H0YJX3 145 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 CCRL2O00421 344 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 GAPDHP04406 335 aaKnown RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 ELANEP08246 267 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 KCNJ3P48549 501 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 PPP3R1P63098 170 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 PAX5Q02548 391 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 IL13RA2Q14627 380 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 RSU1Q15404 277 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 ZNF260Q3ZCT1 412 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 PAN3Q58A45 887 aaKnown RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 SATL1Q86VE3 508 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 SETD9Q8NE22 299 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 OR10A7Q8NGE5 316 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 OR2T10Q8NGZ9 312 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 CNIH3Q8TBE1 160 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 MRGPRDQ8TDS7 321 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 TNFAIP8L1Q8WVP5 186 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 TMEM106AQ96A25 262 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 NR1H4Q96RI1 486 aaPredicted RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 LIN7CQ9NUP9 197 aaKnown RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 PAK1IP1Q9NWT1 392 aaPredicted RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 DIMT1Q9UNQ2 313 aaKnown RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
DDX41-211ENST00000510171 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
DDX41-211ENST00000510171 IGHV3-72A0A0B4J1Y9 119 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 IGHV1-3A0A0C4DH29 117 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 A0A1W2PPE3 182 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 GABRPO00591 440 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 HSD17B6O14756 317 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 RRP9O43818 475 aaKnown RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 LY86O95711 162 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 REG1BP48304 166 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 SOX2P48431 317 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 ETV1P50549 477 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 SMN1Q16637 294 aaKnown RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 TTC23Q5W5X9 447 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 ASCL4Q6XD76 172 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 PACRGLQ8N7B6 248 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 Q8N9W7 124 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 RGP1Q92546 391 aaPredicted RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 SMIM19Q96E16 107 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 RASL11BQ9BPW5 248 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 FAM192AQ9GZU8 254 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 TMEM138Q9NPI0 162 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 CHCHD3Q9NX63 227 aaKnown RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 BABAM2Q9NXR7 383 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 TAS2R4Q9NYW5 299 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 IL36GQ9NZH8 169 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 CKLFQ9UBR5 152 aa8.15□□□□□ -1.1
DDX41-211ENST00000510171 EXOSC1Q9Y3B2 195 aaKnown RBP8.15□□□□□ -1.1
DDX41-211ENST00000510171 OGG1O15527 345 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 ZNF780AO75290 641 aaPredicted RBP8.14□□□□□ -1.11
DDX41-211ENST00000510171 MOSP00540 346 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 IGHG4P01861 327 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 CSTBP04080 98 aaKnown RBP8.14□□□□□ -1.11
DDX41-211ENST00000510171 LYL1P12980 280 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 GZMHP20718 246 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 VDAC1P21796 283 aa8.14□□□□□ -1.11
DDX41-211ENST00000510171 SSTR5P35346 364 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms