RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 NUDT19A8MXV4 375 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 FGF16O43320 207 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 REG1BP48304 166 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 SLC35B1P78383 322 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 PAX5Q02548 391 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 MED21Q13503 144 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 SLC22A6Q4U2R8 563 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 SLC35E3Q7Z769 313 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 STX19Q8N4C7 294 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 UBALD1Q8TB05 177 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 ORAI1Q96D31 301 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 IFT22Q9H7X7 185 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 SMPD3Q9NY59 655 aaPredicted RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 IL36GQ9NZH8 169 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 EXOSC1Q9Y3B2 195 aaKnown RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
TPM3-219ENST00000509409 SIRT4Q9Y6E7 314 aaPredicted RBP12.19□□□□□ -0.46
TPM3-219ENST00000509409 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
TPM3-219ENST00000509409 HSD17B6O14756 317 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 OGG1O15527 345 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 ZNF780AO75290 641 aaPredicted RBP12.18□□□□□ -0.46
TPM3-219ENST00000509409 GTF2F2P13984 249 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 RPL23AP62750 156 aaKnown RBP12.18□□□□□ -0.46
TPM3-219ENST00000509409 RIPK1Q13546 671 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 OR13C5Q8NGS8 318 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 CYGBQ8WWM9 190 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 DPF1Q92782 380 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 GHSRQ92847 366 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 SMIM19Q96E16 107 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 ZNF184Q99676 751 aaPredicted RBP12.18□□□□□ -0.46
TPM3-219ENST00000509409 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 ZFP57Q9NU63 452 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 CKLFQ9UBR5 152 aa12.18□□□□□ -0.46
TPM3-219ENST00000509409 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 IGHV1-3A0A0C4DH29 117 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 K7EIL1 84 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 IL3RAP26951 378 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
TPM3-219ENST00000509409 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
TPM3-219ENST00000509409 GPR176Q14439 515 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 MPV17LQ2QL34 196 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 MRPL41Q8IXM3 137 aaKnown RBP12.17□□□□□ -0.46
TPM3-219ENST00000509409 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 OR52M1Q8NGK5 317 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 RDH12Q96NR8 316 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
TPM3-219ENST00000509409 A0A1W2PP11 408 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 A0A1W2PPK0 400 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 MCRIP1C9JLW8 97 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 C15orf65H3BRN8 121 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 AIPO00170 330 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 ORC5O43913 435 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 IGHG2P01859 326 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 MT-ND4P03905 459 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 TTC23Q5W5X9 447 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 C8orf86Q6ZUL3 223 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 OR2W3Q7Z3T1 314 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 JAGN1Q8N5M9 183 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 COMMD1Q8N668 190 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 ZFP41Q8N8Y5 198 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 KLHL30-AS1Q8NEE0 82 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 OR2T10Q8NGZ9 312 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
TPM3-219ENST00000509409 GFOD1Q9NXC2 390 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
TPM3-219ENST00000509409 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
TPM3-219ENST00000509409 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 WI2-2373I1.2A0A1W2PRP0 233 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 EBAG9O00559 213 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 SPINT2O43291 252 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 LALBAP00709 142 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
TPM3-219ENST00000509409 MYCNOSP40205 109 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 THBS3P49746 956 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 EBI3Q14213 229 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 LRRC36Q1X8D7 754 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 Q499Y3 187 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 YIF1BQ5BJH7 314 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 FAM53AQ6NSI3 398 aaPredicted RBP12.15□□□□□ -0.46
TPM3-219ENST00000509409 GLIPR1L1Q6UWM5 242 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 STPG2Q8N412 459 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 MUL1Q969V5 352 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms