RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RSRP1Q9BUV0 290 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 SFXN3Q9BWM7 321 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 KCNS2Q9ULS6 477 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 NMBP08949 121 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
PHF3-209ENST00000509330 EGR1P18146 543 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 CEACAM8P31997 349 aaPredicted RBP12.55□□□□□ -0.4
PHF3-209ENST00000509330 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 DCTN5Q9BTE1 182 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 PMELP40967 661 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 SCARB1Q8WTV0 552 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 MSI2Q96DH6 328 aaKnown RBP12.55□□□□□ -0.4
PHF3-209ENST00000509330 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 RNF150Q9ULK6 438 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
PHF3-209ENST00000509330 KITLGP21583 273 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 PRSS54Q6PEW0 395 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 LINC00596Q86U02 117 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 Q8IYB0 196 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ZCCHC24Q8N2G6 241 aaKnown RBP12.54□□□□□ -0.4
PHF3-209ENST00000509330 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 OR2V2Q96R30 315 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 OR8U9P0C7N5 309 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ZNF250P15622 560 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 MOGAT3Q86VF5 341 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 OR8U1Q8NH10 309 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 TAAR3PQ9P1P4 343 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 TMEM210A6NLX4 147 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 OR3A1P47881 315 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 COL10A1Q03692 680 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ZNF146Q15072 292 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 TOR2AQ5JU69 321 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ACP7Q6ZNF0 438 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 MEMO1Q9Y316 297 aa12.54□□□□□ -0.4
PHF3-209ENST00000509330 LINC00862A6NCI5 91 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 GPR31O00270 319 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 ASCL1P50553 236 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 KLF3P57682 345 aaPredicted RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 ZNF345Q14585 488 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 MBNL2Q5VZF2 373 aaKnown RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 GALNT14Q96FL9 552 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 EPHA1P21709 976 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 CEACAM6P40199 344 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 GLIPR1P48060 266 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
PHF3-209ENST00000509330 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 LGI3Q8N145 548 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 DHRS9Q9BPW9 319 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
PHF3-209ENST00000509330 TRGV8A0A0C4DH27 118 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 LGALS8O00214 317 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 SSTR5P35346 364 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.4
PHF3-209ENST00000509330 GNMTQ14749 295 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 SUCNR1Q9BXA5 334 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.4
PHF3-209ENST00000509330 OR2W1Q9Y3N9 320 aa12.52□□□□□ -0.4
PHF3-209ENST00000509330 B8ZZF3 427 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 PRSS44E7EML9 344 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 TUSC2O75896 110 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 UCP3P55916 312 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 IL15RAQ13261 267 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 SPERTQ8NA61 448 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 OR10V1Q8NGI7 309 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 OR4A4PQ8NGN8 299 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 TMEM171Q8WVE6 324 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 TMED6Q8WW62 240 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 ITLN1Q8WWA0 313 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 BSCL2Q96G97 398 aaPredicted RBP12.52□□□□□ -0.41
PHF3-209ENST00000509330 SLX1AQ9BQ83 275 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 DNTTIP1Q9H147 329 aa12.52□□□□□ -0.41
PHF3-209ENST00000509330 TRBV6-7A0A0A0MS04 114 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 ABCD4O14678 606 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 SELLP14151 372 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms