RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CSN2P05814 226 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 LIPFP07098 398 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SFTPBP07988 381 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 CSF1P09603 554 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RPS2P15880 293 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 MGMTP16455 207 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 PRKACAP17612 351 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SERPINA2P20848 420 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 ERP29P30040 261 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 CD80P33681 288 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SOX6P35712 828 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 GABRA2P47869 451 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 NPBWR2P48146 333 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SERPINB10P48595 397 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 PITPNBP48739 271 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RORCP51449 518 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RBM11P57052 281 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 VBP1P61758 197 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 LMO4P61968 165 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 HOXA4Q00056 320 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 PAX5Q02548 391 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 KRTAP1-1Q07627 177 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RBM39Q14498 530 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 C2orf76Q3KRA6 126 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC22A6Q4U2R8 563 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RAB12Q6IQ22 244 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SFXN4Q6P4A7 337 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF782Q6ZMW2 699 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC16A12Q6ZSM3 486 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 C1QL2Q7Z5L3 287 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 DEFB108BQ8NET1 73 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 WFDC11Q8NEX6 87 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR4D6Q8NGJ1 314 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR5D18Q8NGL1 313 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 DDB2Q92466 427 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC25A28Q96A46 364 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RFT1Q96AA3 541 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC25A46Q96AG3 418 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM3DQ96BQ1 224 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 DGCR14Q96DF8 476 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 C18orf12Q96KH6 178 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 C1orf147Q96MC9 270 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 GAFA1Q96PS6 74 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 GFI1Q99684 422 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 NUDT16L1Q9BRJ7 211 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 TMEM59Q9BXS4 323 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 WDR13Q9H1Z4 485 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 DCSTAMPQ9H295 470 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RBFOX1Q9NWB1 397 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 DCAF16Q9NXF7 216 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 CLN8Q9UBY8 286 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 RSL24D1Q9UHA3 163 aaKnown RBP4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 SPATA2Q9UM82 520 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 ST3GAL6Q9Y274 331 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 HIVEP1P15822 2718 aa4.54□□□□□ -1.68
HMGB1P44-201ENST00000508597 ABCA2Q9BZC7 2435 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 IGKV1D-17A0A075B6S4 117 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 IGHV4-61A0A0C4DH41 118 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 F8VVB4 439 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 F8VWA3 439 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 J3KRW8 73 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 WNT9BO14905 357 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 DEGS1O15121 323 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 LDLRAD4O15165 306 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF737O75373 536 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 CRTAPO75718 401 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 TPPPO94811 219 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR2H2O95918 312 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 GYPAP02724 150 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF44P15621 663 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF182P17025 639 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 FUT3P21217 361 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR10A3P58181 314 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 NCS1P62166 190 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 LSM3P62310 102 aaKnown RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 GNB2P62879 340 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RPS27AP62979 156 aaKnown RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 QRFPP83859 136 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 MXD1Q05195 221 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 MEF2CQ06413 473 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 P2RY14Q15391 338 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 TMEM249Q2WGJ8 235 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM201AQ5SY85 155 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 AVPI1Q5T686 147 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 HES5Q5TA89 166 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 WDR25Q64LD2 544 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 CYB5R2Q6BCY4 276 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 Q6P435 159 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 TMEM65Q6PI78 240 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF841Q6ZN19 808 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR8H2Q8N162 312 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM89BQ8N5H3 189 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR51D1Q8NGF3 324 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR56B1Q8NGI3 324 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 C8orf46Q8TAG6 207 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 PHF21AQ96BD5 680 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 ISOC1Q96CN7 298 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms