RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SLC22A1O15245 554 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 IGHV3-7P01780 117 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
LMNA-222ENST00000508500 ALDOBP05062 364 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 HSMCR30P0CW71 290 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 CD83Q01151 205 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 IL13RA2Q14627 380 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 PAN3Q58A45 887 aaKnown RBP12.93□□□□□ -0.34
LMNA-222ENST00000508500 NDUFA11Q86Y39 141 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 OR4D6Q8NGJ1 314 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 GPR148Q8TDV2 347 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 TMEM106AQ96A25 262 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
LMNA-222ENST00000508500 GPER1Q99527 375 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 NCOR1P1Q9H4R4 102 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 CALYQ9NYX4 217 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 OR6C3Q9NZP0 311 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 ZNF281Q9Y2X9 895 aa12.93□□□□□ -0.34
LMNA-222ENST00000508500 MEIKINA0A087WXM9 373 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A18PA6NE21 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A16PA6NEW6 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A20PA6NIJ5 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A12PA8MX19 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A5PA8MXJ8 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 NPIPB11E5RHQ5 1161 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 TOR1AO14656 332 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 OR2F2O95006 317 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 HTR3BO95264 441 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A15PP0C7V4 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A13PP0C7W8 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A14PP0C7W9 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 FAM90A24PP0C7X0 464 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 IGFBP3P17936 291 aaPredicted RBP12.92□□□□□ -0.34
LMNA-222ENST00000508500 NFYBP25208 207 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 BRS3P32247 399 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 GLP1RP43220 463 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 RPS11P62280 158 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMNA-222ENST00000508500 PAX5Q02548 391 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 DOC2BQ14184 412 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 C10orf99Q6UWK7 81 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 C16orf82Q7Z2V1 217 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 OR9G1Q8NH87 305 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 R3HDM4Q96D70 268 aa12.92□□□□□ -0.34
LMNA-222ENST00000508500 TRBV5-5A0A0J9YX44 114 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 A0A1W2PP11 408 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 H3BMQ9 156 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 J3QR06 171 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 AIREO43918 545 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 IL1AP01583 271 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 LPLP06858 475 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 PRRX1P54821 245 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 RBM39Q14498 530 aaKnown RBP12.91□□□□□ -0.34
LMNA-222ENST00000508500 RSU1Q15404 277 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 CTF1Q16619 201 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 CNPY1Q3B7I2 92 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 ABCA11PQ4W5N1 156 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 ARSJQ5FYB0 599 aaPredicted RBP12.91□□□□□ -0.34
LMNA-222ENST00000508500 DMKNQ6E0U4 476 aaPredicted RBP12.91□□□□□ -0.34
LMNA-222ENST00000508500 SLC16A12Q6ZSM3 486 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 SUMF2Q8NBJ7 301 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 RFESDQ8TAC1 157 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 MRGPRDQ8TDS7 321 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 SMIM19Q96E16 107 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 IDI2-AS1Q9NZ38 188 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 STUB1Q9UNE7 303 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
LMNA-222ENST00000508500 MAGEB3O15480 346 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 PEX14O75381 377 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 CD2P06729 351 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 FGF9P31371 208 aaPredicted RBP12.9□□□□□ -0.34
LMNA-222ENST00000508500 SSTR5P35346 364 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 ZNF93P35789 620 aaPredicted RBP12.9□□□□□ -0.34
LMNA-222ENST00000508500 SSX1Q16384 188 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 LTC4SQ16873 150 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 NHLRC3Q5JS37 347 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 FAM53AQ6NSI3 398 aaPredicted RBP12.9□□□□□ -0.34
LMNA-222ENST00000508500 CD200R1LQ6Q8B3 271 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 CYYR1Q96J86 154 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 PGLYRP3Q96LB9 341 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 DPCDQ9BVM2 203 aaPredicted RBP12.9□□□□□ -0.34
LMNA-222ENST00000508500 BARHL1Q9BZE3 327 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 IFT22Q9H7X7 185 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 TMEM138Q9NPI0 162 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 ST3GAL6Q9Y274 331 aa12.9□□□□□ -0.34
LMNA-222ENST00000508500 TRAV8-7A0A075B6U6 113 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms