RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NINQ8N4C6 2090 aa6.42□□□□□ -1.38
UBE2D3-224ENST00000508474 IGHV3-20A0A0C4DH32 117 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MPZL1O95297 269 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 PNLIPP16233 465 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 BTCP35070 178 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MPLP40238 635 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 FHITP49789 147 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 CEACAM16Q2WEN9 425 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SAMD13Q5VXD3 122 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SCCPDHQ8NBX0 429 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 PERPQ96FX8 193 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 REG4Q9BYZ8 158 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 C6orf106Q9H6K1 298 aaPredicted RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DUSP13Q9UII6 198 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MPC1Q9Y5U8 109 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TRGV10A0A0A0MS01 117 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DPRXA6NFQ7 191 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 F8VVB4 439 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 F8VWA3 439 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 NDUFB4O95168 129 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 BGLAPP02818 100 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SRP19P09132 144 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SMIM17P0DL12 118 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DMRTC1Q5HYR2 192 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 OR4S2Q8NH73 311 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 ZNF519Q8TB69 540 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 R3HDM4Q96D70 268 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MARS2Q96GW9 593 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 WDYHV1Q96HA8 205 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 HSD17B10Q99714 261 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SLC25A33Q9BSK2 321 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 EGLN1Q9GZT9 426 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 VCX2Q9H322 139 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 C5orf66Q9H5L9 145 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 A8MWL6 223 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 UPK3AO75631 287 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 NTN1O95631 604 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 FCGR3AP08637 254 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 ZNF708P17019 499 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MFAP2P55001 183 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 FNDC7Q5VTL7 733 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TEPPQ6URK8 271 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SSX8Q7RTT4 187 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DOLPP1Q86YN1 238 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TMEM45BQ96B21 275 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 MBD1Q9UIS9 605 aaPredicted RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 FOCADQ5VW36 1801 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SCN9AQ15858 1988 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 A0A1B0GTI1 187 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 COLCA2A8K830 154 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DLEU1O43261 78 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 CXCL13O43927 109 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 ORM1P02763 201 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 COL8A1P27658 744 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 ID4P47928 161 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 COMPP49747 757 aaPredicted RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SRSF9Q13242 221 aaKnown RBP eCLIP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 CYP2G1PQ6ZSU1 146 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 VN1R4Q7Z5H5 301 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 TAF15Q92804 592 aaKnown RBP eCLIP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 QTRT1Q9BXR0 403 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 ZNF355PQ9NSJ1 428 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 DECR2Q9NUI1 292 aa6.41□□□□□ -1.38
UBE2D3-224ENST00000508474 SIPA1L3O60292 1781 aaPredicted RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 NUMA1Q14980 2115 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TRAV14DV4A0A0A6YYC5 116 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 A0A0G2JK05 382 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 PRRT4C9JH25 899 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 IGHV3-9P01782 118 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 OPRK1P41145 380 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 RPS4XP62701 263 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 DEFB103AP81534 67 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 COL10A1Q03692 680 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 PDCD1Q15116 288 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 YRDCQ86U90 279 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 RFLNBQ8N5W9 214 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 LRRC75AQ8NAA5 344 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 Q8WTZ3 238 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TMEM230Q96A57 120 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 SPACA9Q96E40 222 aaPredicted RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 LAMTOR2Q9Y2Q5 125 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 KLHDC2Q9Y2U9 406 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 FBLL1A6NHQ2 334 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TNFSF11O14788 317 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 UQCRFS1P47985 274 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TNFSF10P50591 281 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TGIF1Q15583 401 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 CDKN3Q16667 212 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 IBA57Q5T440 356 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 C1QL3Q5VWW1 255 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 OR8I2Q8N0Y5 310 aa6.4□□□□□ -1.38
UBE2D3-224ENST00000508474 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms