RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MRPL48Q96GC5 212 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 CEP19Q96LK0 163 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 CHIAQ9BZP6 476 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 PKIBQ9C010 78 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 NEK6Q9HC98 313 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 BABAM2Q9NXR7 383 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 GSTK1Q9Y2Q3 226 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 POLDIP2Q9Y2S7 368 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 FAM96BQ9Y3D0 163 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 KPTNQ9Y664 436 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ANK2Q01484 3957 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 TRAV39A0A0B4J263 110 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 A0A0G2JK05 382 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 MEIOCA2RUB1 952 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 K7N7A8 449 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 SIRPB1O00241 398 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 DEGS1O15121 323 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OGG1O15527 345 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 MMP23AO75900 390 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 HAND1O96004 215 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 HCKP08631 526 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 MDKP21741 143 aaPredicted RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 PRKACBP22694 351 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 EEF1B2P24534 225 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 C21orf33P30042 268 aaPredicted RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 SAA4P35542 130 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 RFX2P48378 723 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 COMPP49747 757 aaPredicted RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 RAB13P51153 203 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 BMXP51813 675 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 EDDM3BP56851 147 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 SLC34A1Q06495 639 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ZNF273Q14593 569 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 KISS1Q15726 138 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ODF3L2Q3SX64 289 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ASPHD2Q6ICH7 369 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 C16orf87Q6PH81 154 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 FIP1L1Q6UN15 594 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 BAIAP2L2Q6UXY1 529 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 TMPRSS11AQ6ZMR5 421 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 C17orf107Q6ZR85 190 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 C9orf139Q6ZV77 190 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 UTS2BQ765I0 119 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 GDPD3Q7L5L3 318 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 SERPINA12Q8IW75 414 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 FAM58AQ8N1B3 248 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 SYS1Q8N2H4 156 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ZNF561Q8N587 486 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 C11orf42Q8N5U0 333 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 KIR3DL3Q8N743 410 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 PACRGLQ8N7B6 248 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 CCDC54Q8NEL0 328 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 DNAAF1Q8NEP3 725 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OR4S1Q8NGB4 309 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OR51A2Q8NGJ7 313 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OR5D14Q8NGL3 314 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OR10K1Q8NGX5 313 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 C8orf46Q8TAG6 207 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ZFAND2BQ8WV99 257 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 TSEN15Q8WW01 171 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 PP6455Q8WZ26 134 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 GHSRQ92847 366 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 TNFRSF14Q92956 283 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 EMG1Q92979 244 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 ITFG2Q969R8 447 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 TMEM80Q96HE8 168 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 RDH12Q96NR8 316 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 OPALINQ96PE5 141 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 CHST5Q9GZS9 411 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 DCLRE1BQ9H816 532 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 METTL8Q9H825 291 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 HES4Q9HCC6 221 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 HMG20AQ9NP66 347 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 INPP5EQ9NRR6 644 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 TAS2R4Q9NYW5 299 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ZNF581Q9P0T4 197 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 PSORS1C1Q9UIG5 152 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 ING4Q9UNL4 249 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 DIMT1Q9UNQ2 313 aaKnown RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 DHDHQ9UQ10 334 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 CAB39Q9Y376 341 aaPredicted RBP3.67□□□□□ -1.82
NUP54-206ENST00000508465 PCDHGB5Q9Y5G0 923 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 NBEAL1Q6ZS30 2694 aa3.67□□□□□ -1.82
NUP54-206ENST00000508465 VWFP04275 2813 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 TRAV8-7A0A075B6U6 113 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 FAM172BPA6NC97 362 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 EFCAB10A6NFE3 127 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 TMEM212A6NML5 194 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 M0R1W7 72 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 HSPB6O14558 160 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 SH2D1BO14796 132 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 CASQ2O14958 399 aaPredicted RBP3.66□□□□□ -1.82
NUP54-206ENST00000508465 GPR137BO60478 399 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 ZNF737O75373 536 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 CDRT1O95170 752 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 OR2H2O95918 312 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 CYB5AP00167 134 aa3.66□□□□□ -1.82
NUP54-206ENST00000508465 PAHP00439 452 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms