RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 A0A087X0M5 115 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 A0A1B0GX30 115 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 SMIM30A4D0T7 59 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 ODF3BA8MYP8 253 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 MMP23AO75900 390 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 MELTFP08582 738 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 OMGP23515 440 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 CD34P28906 385 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 PRRX1P54821 245 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 UBA52P62987 128 aaKnown RBP12.21□□□□□ -0.45
RNF4-210ENST00000508235 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 C6orf201Q7Z4U5 140 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 ZNF554Q86TJ5 538 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 ABHD12Q8N2K0 398 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 ZDHHC22Q8N966 263 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 BEND2Q8NDZ0 799 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 KIRREL1Q96J84 757 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.45
RNF4-210ENST00000508235 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 ESM1Q9NQ30 184 aa12.21□□□□□ -0.45
RNF4-210ENST00000508235 NF1P21359 2839 aa12.21□□□□□ -0.46
RNF4-210ENST00000508235 POM121CA8CG34 1229 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 RNF212BA8MTL3 300 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 TOR1AO14656 332 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 SOCS1O15524 211 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 SPINT2O43291 252 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
RNF4-210ENST00000508235 SCGNO76038 276 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 SLC2A2P11168 524 aaPredicted RBP12.2□□□□□ -0.46
RNF4-210ENST00000508235 NFYBP25208 207 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 SSTR5P35346 364 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 VEGFCP49767 419 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 MINOS1Q5TGZ0 78 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 Q6ZTK2 550 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 GPR141Q7Z602 305 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 OR4K15Q8NH41 348 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 ARL11Q969Q4 196 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 ZNRD1Q9P1U0 126 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 MINOS1-NBL1R4GNA1 71 aa12.2□□□□□ -0.46
RNF4-210ENST00000508235 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 A0A0A6YYD4 124 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
RNF4-210ENST00000508235 HTR1DP28221 377 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 IER3P46695 156 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
RNF4-210ENST00000508235 AANATQ16613 207 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 IDNKQ5T6J7 187 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 MOB1BQ7L9L4 216 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 OR52M1Q8NGK5 317 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 OR5R1Q8NH85 324 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 RFESDQ8TAC1 157 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 DYRK2Q92630 601 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 ATG5Q9H1Y0 275 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 CHMP1AQ9HD42 196 aaPredicted RBP12.19□□□□□ -0.46
RNF4-210ENST00000508235 MBNL3Q9NUK0 354 aaKnown RBP12.19□□□□□ -0.46
RNF4-210ENST00000508235 MGAT4AQ9UM21 535 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
RNF4-210ENST00000508235 A0A0B4J203 849 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 C15orf65H3BRN8 121 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 CLEC2LP0C7M8 214 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 GDNFP39905 211 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 CEACAM3P40198 252 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 LSM3P62310 102 aaKnown RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 KRTAP24-1Q3LI83 254 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 ANKRD13BQ86YJ7 626 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 NDNFQ8TB73 568 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 MRPL30Q8TCC3 161 aaKnown RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 ARHGAP5-AS1Q96IT6 56 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 PECRQ9BY49 303 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
RNF4-210ENST00000508235 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
RNF4-210ENST00000508235 TRBV6-6A0A0A6YYG2 114 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 SERPINE3A8MV23 424 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 F2RL2O00254 374 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 NAPSAO96009 420 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 ALDH3B2P48448 385 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 EFNB2P52799 333 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms