RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 DYNLL1P63167 89 aaKnown RBP1.5□□□□□ -2.17
LSM6-205ENST00000507449 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 C17orf78Q8N4C9 275 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 FER1L6-AS1Q8NA97 138 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 OR10D4PQ8NGN7 298 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 RNASEH2CQ8TDP1 164 aaKnown RBP1.5□□□□□ -2.17
LSM6-205ENST00000507449 GTF2H4Q92759 462 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 CCDC127Q96BQ5 260 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 ARL6Q9H0F7 186 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 OR52A5Q9H2C5 316 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 CHMP5Q9NZZ3 219 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 MCTS1Q9ULC4 181 aaKnown RBP1.5□□□□□ -2.17
LSM6-205ENST00000507449 PTPRKQ15262 1439 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 KIAA0232Q92628 1395 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 USP42Q9H9J4 1324 aaKnown RBP1.49□□□□□ -2.17
LSM6-205ENST00000507449 IQCF5A8MTL0 148 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 MKRN2OSH3BPM6 223 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 SLC31A1O15431 190 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 MPZL2O60487 215 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 CDS2O95674 445 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 SNAP29O95721 258 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 FUSP35637 526 aaKnown RBP eCLIP1.49□□□□□ -2.17
LSM6-205ENST00000507449 UGT2B10P36537 528 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 CBX5P45973 191 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 INPP1P49441 399 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 SLAMF1Q13291 335 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 TMED1Q13445 227 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 USF2Q15853 346 aaPredicted RBP1.49□□□□□ -2.17
LSM6-205ENST00000507449 TMEM249Q2WGJ8 235 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 MSRB3Q8IXL7 192 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 OR9I1Q8NGQ6 314 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 OR11L1Q8NGX0 322 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 SUN5Q8TC36 379 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 LMX1AQ8TE12 382 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 POTEKPQ9BYX7 375 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 ZNF286AQ9HBT8 521 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 NAGKQ9UJ70 344 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 URGCP-MRPS24S4R325 110 aa1.49□□□□□ -2.17
LSM6-205ENST00000507449 ZNF407Q9C0G0 2248 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 IGHV3OR15-7A0A075B7D8 119 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 ARGFXA6NJG6 315 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 HSBP1L1C9JCN9 74 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 M0QX08 132 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 GYPCP04921 128 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 GUSBP08236 651 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 CTSGP08311 255 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 PSKH1P11801 424 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 AKR1C4P17516 323 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 SPAM1P38567 509 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 HSPA13P48723 471 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 PSMD7P51665 324 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 APOFQ13790 326 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 SYCP1Q15431 976 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 RBM48Q5RL73 367 aaKnown RBP1.48□□□□□ -2.17
LSM6-205ENST00000507449 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 XKRXQ6PP77 449 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 TCF23Q7RTU1 214 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 NIT1Q86X76 327 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 SYCE1Q8N0S2 351 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 ZNRF2Q8NHG8 242 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 TMEM56Q96MV1 263 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 OR8B2Q96RD0 313 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 HIGD2AQ9BW72 106 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 SLC19A3Q9BZV2 496 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 KCNIP2Q9NS61 270 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 FBXL3Q9UKT7 428 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 NUP205Q92621 2012 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 VWA8A3KMH1 1905 aa1.48□□□□□ -2.17
LSM6-205ENST00000507449 ERICH4A6NGS2 130 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 EFCAB9A8MZ26 197 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 SMLR1H3BR10 107 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 PSCAO43653 123 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 ZNF73O43830 326 aaPredicted RBP1.47□□□□□ -2.17
LSM6-205ENST00000507449 NEMFO60524 1076 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 RD3LP0DJH9 198 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 KDELR2P33947 212 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 GZMMP51124 257 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 SKP2Q13309 424 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 PYCR3Q53H96 274 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 TIMM23BQ5SRD1 257 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 VN1R4Q7Z5H5 301 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 BOD1L2Q8IYS8 172 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 C2orf73Q8N5S3 287 aaPredicted RBP1.47□□□□□ -2.17
LSM6-205ENST00000507449 YIPF7Q8N8F6 280 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 OR5D18Q8NGL1 313 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 SPPL2BQ8TCT7 592 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 DYNC2LI1Q8TCX1 351 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 CFAP53Q96M91 514 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 DMAC2Q9NW81 257 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 SCML1Q9UN30 329 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 MTCH2Q9Y6C9 303 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 CRB1P82279 1406 aa1.47□□□□□ -2.17
LSM6-205ENST00000507449 LINC00854A0A1B0GVQ3 168 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 EEF1E1O43324 174 aaKnown RBP1.46□□□□□ -2.18
LSM6-205ENST00000507449 SYNGR1O43759 233 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 SCN2BO60939 215 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 CDK14O94921 469 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 OR12D1P0DN82 309 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms