RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 OTOSQ8NHW6 89 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 TMEM163Q8TC26 289 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DEFB104AQ8WTQ1 72 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FBLIM1Q8WUP2 373 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 THEM6Q8WUY1 208 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RNF133Q8WVZ7 376 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SPSB4Q96A44 273 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FLYWCH2Q96CP2 140 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CPNE2Q96FN4 548 aaPredicted RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 REEP6Q96HR9 211 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 EAF1Q96JC9 268 aaPredicted RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RHOVQ96L33 236 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF714Q96N38 554 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RDH12Q96NR8 316 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 IL4I1Q96RQ9 567 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CIB1Q99828 191 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 APOL4Q9BPW4 351 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 MICU1Q9BPX6 476 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ABHD6Q9BV23 337 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RTL8AQ9BWD3 113 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 TTTY10Q9BZA0 68 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 YIPF3Q9GZM5 350 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 VCX3BQ9H321 246 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 HRH4Q9H3N8 390 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 MED20Q9H944 212 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 NEK6Q9HC98 313 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 BRD7Q9NPI1 651 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 C8orf4Q9NR00 106 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 MRPL22Q9NWU5 206 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CHCHD3Q9NX63 227 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SLC2A8Q9NY64 477 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 WARS2Q9UGM6 360 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 GMPPBQ9Y5P6 360 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 TRAV10A0A0B4J240 114 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 hCG_38984A0A1B0GV85 526 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 OR5B21A6NL26 309 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM210A6NLX4 147 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZAR1LA6NP61 321 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 M0R129 80 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 PSMD9O00233 223 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF593O00488 134 aaPredicted RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 UBE2CO00762 179 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ARPC1BO15143 372 aaKnown RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ATP6V0E1O15342 81 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 PRKYO43930 277 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF254O75437 659 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 BAG2O95816 211 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ALPLP05186 524 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 UBCP0CG48 685 aaKnown RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 OR5H8P0DN80 308 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ATP6V1B1P15313 513 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF20P17024 532 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 MYL12AP19105 171 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 BTF3P20290 206 aaKnown RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 SLC2A5P22732 501 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 HLA-DMBP28068 263 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 HTR1FP30939 366 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 PRDX2P32119 198 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 MNDAP41218 407 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 GLIPR1P48060 266 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 DAPP51397 102 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ARHGDIBP52566 201 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 F2RL1P55085 397 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 SYNJ2BPP57105 145 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 CXCR4P61073 352 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 FAM3AP98173 230 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 CDK5Q00535 292 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 NDPQ00604 133 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 MRPL28Q13084 256 aaKnown RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TMED1Q13445 227 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ICAM4Q14773 271 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 RCN1Q15293 331 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 DEFB114Q30KQ6 69 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 SMIM21Q3B7S5 101 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 LINC01590Q5TEZ4 76 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 PRAMEF5Q5TYX0 476 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 MEDAGQ5VYS4 303 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM236Q5W0B7 351 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 PLCXD3Q63HM9 321 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 C12orf73Q69YU5 71 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF660Q6AZW8 331 aaPredicted RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 KDM4DQ6B0I6 523 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 DEGS2Q6QHC5 323 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF322Q6U7Q0 402 aaPredicted RBP2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZBTB49Q6ZSB9 765 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ASRGL1Q7L266 308 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 AMIGO2Q86SJ2 522 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 RTN4RL2Q86UN3 420 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TIGD4Q8IY51 512 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 IZUMO1Q8IYV9 350 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 CBR4Q8N4T8 237 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TCEANCQ8N8B7 351 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 YIPF7Q8N8F6 280 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 Q8NAQ8 132 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF511Q8NB15 262 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM104Q8NE00 496 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 CCDC54Q8NEL0 328 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 BBS1Q8NFJ9 593 aa2.4□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF596Q8TC21 504 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms