RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RPL22L1Q6P5R6 122 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 PQLC1Q8N2U9 271 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 APH1BQ8WW43 257 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 S100A14Q9HCY8 104 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 HSD17B6O14756 317 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 MYL12AP19105 171 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 BDKRB2P30411 391 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 REG1BP48304 166 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 ETV1P50549 477 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF529Q6P280 563 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 OR8H3Q8N146 312 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 OR52N1Q8NH53 320 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 UBALD1Q8TB05 177 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 CHPT1Q8WUD6 406 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 CCDC107Q8WV48 283 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 NOL4LQ96MY1 436 aaPredicted RBP12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 NCOR1P1Q9H4R4 102 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 TMEM138Q9NPI0 162 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 MRPS18AQ9NVS2 196 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 PAK1IP1Q9NWT1 392 aaPredicted RBP12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF581Q9P0T4 197 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
PDLIM7-213ENST00000505074 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 NPIPB11E5RHQ5 1161 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 CCRL2O00421 344 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 SDCBPO00560 298 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 GEMIN2O14893 280 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 SLC35B1P78383 322 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 CCDC58Q4VC31 144 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 SLC35E3Q7Z769 313 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 ORAI1Q96D31 301 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 SMPD3Q9NY59 655 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 CKLFQ9UBR5 152 aa12.65□□□□□ -0.38
PDLIM7-213ENST00000505074 IGHV3-43A0A0B4J1X8 118 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 IRGMA1A4Y4 181 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 NCBP2LA6PVI3 153 aaKnown RBP12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 FGF16O43320 207 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 GAPDHP04406 335 aaKnown RBP12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 IGHV3-43DP0DP04 118 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 DCKP27707 260 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 THBS3P49746 956 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 RIPK1Q13546 671 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 LINC00596Q86U02 117 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 STX19Q8N4C7 294 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 SMIM19Q96E16 107 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 ZNF184Q99676 751 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
PDLIM7-213ENST00000505074 AIPO00170 330 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 WBP4O75554 376 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 GZMHP20718 246 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 IL3RAP26951 378 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 RAB25P57735 213 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 RPL23AP62750 156 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 PAX5Q02548 391 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 MED21Q13503 144 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 CYGBQ8WWM9 190 aa12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 EXOSC1Q9Y3B2 195 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-213ENST00000505074 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 A0A1W2PP11 408 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 ZNF780AO75290 641 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 GTF2F2P13984 249 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 CHATP28329 748 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 ZNF816Q0VGE8 651 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 JAGN1Q8N5M9 183 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms