RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
HOXC9-202ENST00000504557 TOMM40LQ969M1 308 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 ARL11Q969Q4 196 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 RPEQ96AT9 228 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 MMP28Q9H239 520 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 RANBP3Q9H6Z4 567 aaPredicted RBP11.45□□□□□ -0.58
HOXC9-202ENST00000504557 ETAA1Q9NY74 926 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 TRAPPC2LQ9UL33 140 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 PSG11Q9UQ72 335 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 PEX16Q9Y5Y5 336 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 TRRAPQ9Y4A5 3859 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
HOXC9-202ENST00000504557 J3QR06 171 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 SDCBPO00560 298 aaPredicted RBP11.44□□□□□ -0.58
HOXC9-202ENST00000504557 ATP6V1G2O95670 118 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 TSPAN15O95858 294 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 CRHBPP24387 322 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 CD34P28906 385 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 HSPA13P48723 471 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 BLCAPP62952 87 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 GLT8D1Q68CQ7 371 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 Q6ZS46 218 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 OR10X1Q8NGY0 326 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 PRSS22Q9GZN4 317 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 IFT22Q9H7X7 185 aa11.44□□□□□ -0.58
HOXC9-202ENST00000504557 AMMECR1Q9Y4X0 333 aaPredicted RBP11.44□□□□□ -0.58
HOXC9-202ENST00000504557 H3BUI4 141 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 SRMP19623 302 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 MNDAP41218 407 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 DYNLT3P51808 116 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 DIAPH2-AS1Q14236 149 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 HES1Q14469 280 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 HERPUD1Q15011 391 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 P2RY14Q15391 338 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 SYT6Q5T7P8 510 aaPredicted RBP11.43□□□□□ -0.58
HOXC9-202ENST00000504557 UNQ9370/PRO34162Q6UXP9 181 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 LRRTM1Q86UE6 522 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 CREB3L1Q96BA8 519 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 UQCC2Q9BRT2 126 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 SLC25A33Q9BSK2 321 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 SPACA1Q9HBV2 294 aa11.43□□□□□ -0.58
HOXC9-202ENST00000504557 A0A087X0M5 115 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 A0A1B0GX30 115 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 NPIPB11E5RHQ5 1161 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 MT-ND4P03905 459 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 GZMHP20718 246 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
HOXC9-202ENST00000504557 REG1BP48304 166 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 CDH26Q8IXH8 852 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 OR10V1Q8NGI7 309 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 OR56B4Q8NH76 319 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 MRPS24Q96EL2 167 aaKnown RBP11.42□□□□□ -0.58
HOXC9-202ENST00000504557 Q96M66 194 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 CST11Q9H112 138 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 NCOR1P1Q9H4R4 102 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 PLGRKTQ9HBL7 147 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 SERTAD4Q9NUC0 356 aa11.42□□□□□ -0.58
HOXC9-202ENST00000504557 FAM90A22PA8MWA6 464 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 SNRNP70P08621 437 aaKnown RBP11.41□□□□□ -0.58
HOXC9-202ENST00000504557 CSF1P09603 554 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 UCHL1P09936 223 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 VSIG8P0DPA2 414 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 FUT3P21217 361 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 HTR2CP28335 458 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 MADCAM1Q13477 382 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 HNF4GQ14541 408 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 C2orf68Q2NKX9 166 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 ABCA11PQ4W5N1 156 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 SIGIRRQ6IA17 410 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 PRSS48Q7RTY5 328 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 C5orf24Q7Z6I8 188 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 LYPD6Q86Y78 171 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 DRAM1Q8N682 238 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 OR1L1Q8NH94 360 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 MGLLQ99685 303 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 TMEM59Q9BXS4 323 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 RCC2Q9P258 522 aaKnown RBP11.41□□□□□ -0.58
HOXC9-202ENST00000504557 GNG12Q9UBI6 72 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 BLOC1S6Q9UL45 172 aa11.41□□□□□ -0.58
HOXC9-202ENST00000504557 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
HOXC9-202ENST00000504557 IGHV3-72A0A0B4J1Y9 119 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 C12orf77C9JDV5 145 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 C15orf65H3BRN8 121 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 HSD17B6O14756 317 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 SPINT2O43291 252 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 PDCD6O75340 191 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 FBXO24O75426 580 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 LPLP06858 475 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 CD28P10747 220 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 CPEP16870 476 aa11.4□□□□□ -0.58
HOXC9-202ENST00000504557 RCC1P18754 421 aaPredicted RBP11.4□□□□□ -0.58
HOXC9-202ENST00000504557 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
HOXC9-202ENST00000504557 FABP5Q01469 135 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms