RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 SPACA1Q9HBV2 294 aa10.94□□□□□ -0.66
HOXC6-203ENST00000504315 PSG11Q9UQ72 335 aa10.94□□□□□ -0.66
HOXC6-203ENST00000504315 AMMECR1Q9Y4X0 333 aaPredicted RBP10.94□□□□□ -0.66
HOXC6-203ENST00000504315 KCNAB3O43448 404 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 ORC5O43913 435 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 OR2F2O95006 317 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 AMY1AP04745 511 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 AMY2AP04746 511 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 VSIG10L2P0DP72 767 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 MYF6P23409 242 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 GABPB1Q06547 395 aaPredicted RBP10.93□□□□□ -0.66
HOXC6-203ENST00000504315 GPR50Q13585 617 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 SPHARQ15513 63 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 Q3ZCU0 254 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 ATAD3CQ5T2N8 411 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 ZNF497Q6ZNH5 498 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 THNSL2Q86YJ6 484 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 SGCDQ92629 289 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 Q96M66 194 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
HOXC6-203ENST00000504315 SLC25A33Q9BSK2 321 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 DUSP21Q9H596 190 aa10.93□□□□□ -0.66
HOXC6-203ENST00000504315 TRAV39A0A0B4J263 110 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 A0A1W2PPI3 338 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 PTGES3LE9PB15 166 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 H0YHG0 523 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 MT-ND4P03905 459 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 CD37P11049 281 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 MGMTP16455 207 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 CD24P25063 80 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 MNDAP41218 407 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 LOXL3P58215 753 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 MADCAM1Q13477 382 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 RBM39Q14498 530 aaKnown RBP10.92□□□□□ -0.66
HOXC6-203ENST00000504315 ACSM3Q53FZ2 586 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 SIGIRRQ6IA17 410 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 LRRTM1Q86UE6 522 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 LINC00311Q8N616 119 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 C8orf31Q8N9H6 132 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 TMEM104Q8NE00 496 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 RFESDQ8TAC1 157 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 PHYHIPQ92561 330 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 TOMM40LQ969M1 308 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 RPEQ96AT9 228 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 SCN3BQ9NY72 215 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
HOXC6-203ENST00000504315 AIPO00170 330 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 FBXO24O75426 580 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 CA11O75493 328 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 GLAP06280 429 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 VDAC2P45880 294 aaPredicted RBP10.91□□□□□ -0.66
HOXC6-203ENST00000504315 RAB7AP51149 207 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 DEFA6Q01524 100 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 INSL4Q14641 139 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 TMEM95Q3KNT9 176 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 FAM27D1Q5T7N8 215 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 C11orf44Q8N8P7 122 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 LEAP2Q969E1 77 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 BANF2Q9H503 90 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 GFOD1Q9NXC2 390 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 TPRKBQ9Y3C4 175 aa10.91□□□□□ -0.66
HOXC6-203ENST00000504315 PRKDCP78527 4128 aaKnown RBP10.9□□□□□ -0.66
HOXC6-203ENST00000504315 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 MCRIP1C9JLW8 97 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 M0QZK8 103 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 IGHV3-7P01780 117 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 OPN1MWP04001 364 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 UCHL1P09936 223 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 UBBP0CG47 229 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 FAM106CPP0CH98 169 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 OPN1MW2P0DN77 364 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 OPN1MW3P0DN78 364 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 CD28P10747 220 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 GNG10P50151 68 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.66
HOXC6-203ENST00000504315 TPBGQ13641 420 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 DIAPH2-AS1Q14236 149 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 LTC4SQ16873 150 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 TMEM30BQ3MIR4 351 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 C1orf100Q5SVJ3 147 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 HIST2H2BDQ6DRA6 164 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 RAB12Q6IQ22 244 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
HOXC6-203ENST00000504315 NEK7Q8TDX7 302 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 ARL11Q969Q4 196 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 SELENOIQ9C0D9 397 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 CST11Q9H112 138 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 VCX3BQ9H321 246 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 ISYNA1Q9NPH2 558 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 MBNL3Q9NUK0 354 aaKnown RBP10.9□□□□□ -0.66
HOXC6-203ENST00000504315 ETAA1Q9NY74 926 aa10.9□□□□□ -0.66
HOXC6-203ENST00000504315 SDCBPO00560 298 aaPredicted RBP10.89□□□□□ -0.67
HOXC6-203ENST00000504315 CRTAPO75718 401 aaPredicted RBP10.89□□□□□ -0.67
HOXC6-203ENST00000504315 SNRNP70P08621 437 aaKnown RBP10.89□□□□□ -0.67
HOXC6-203ENST00000504315 FUT3P21217 361 aa10.89□□□□□ -0.67
HOXC6-203ENST00000504315 CRHBPP24387 322 aa10.89□□□□□ -0.67
HOXC6-203ENST00000504315 CD83Q01151 205 aa10.89□□□□□ -0.67
HOXC6-203ENST00000504315 MED22Q15528 200 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms