RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 DNAL1Q4LDG9 190 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 AKAP14Q86UN6 197 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 CPNE9Q8IYJ1 553 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 GATD1Q8NB37 220 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 ACTL9Q8TC94 416 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 RORBQ92753 470 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 BIRC8Q96P09 236 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 OLFM3Q96PB7 478 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 TAPBPLQ9BX59 468 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 ABCG5Q9H222 651 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 C1orf109Q9NX04 203 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 TAS2R13Q9NYV9 303 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 FBXL3Q9UKT7 428 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 SNX24Q9Y343 169 aa2.53□□□□□ -2
TRAPPC13-205ENST00000504243 SSH2Q76I76 1423 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 KIAA0232Q92628 1395 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 GOLGA6L10A6NI86 522 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 ZNF729A6NN14 1252 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 C4orf51C9J302 202 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 GOLGA8KD6RF30 607 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 H3BQ85 93 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 C15orf65H3BRN8 121 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 FABP7O15540 132 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 DENRO43583 198 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 TRAPPC3O43617 180 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 HRES1P13985 223 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 ELK4P28324 431 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 AQP5P55064 265 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 MAGOHP61326 146 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 PRDX1Q06830 199 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 RAB31Q13636 194 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 TMEM31Q5JXX7 168 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 GLYATQ6IB77 296 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 FAM151BQ6UXP7 276 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 USP50Q70EL3 339 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 OLIG3Q7RTU3 272 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 LRRC34Q8IZ02 419 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 ZFP82Q8N141 532 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 OR8J2Q8NGG1 315 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 PGLYRP3Q96LB9 341 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 CEP19Q96LK0 163 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 ZNF426Q9BUY5 554 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 SUCNR1Q9BXA5 334 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 BTRCQ9Y297 605 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 R4GN34 69 aa2.52□□□□□ -2.01
TRAPPC13-205ENST00000504243 ROCK1Q13464 1354 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 VWA8A3KMH1 1905 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 IGKV1OR2-108A0A075B7D4 117 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 A0A1B0GX12 115 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 D6RAR5 112 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 J3QLI3 93 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 CDIPTO14735 213 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 ASS1P00966 412 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 PET100P0DJ07 73 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 SPNP16150 400 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 PYCR1P32322 319 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 GTF2H1P32780 548 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 COILP38432 576 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 RPL14P50914 215 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 POLR2GP62487 172 aaKnown RBP eCLIP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 S100A12P80511 92 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 CD164Q04900 197 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 BAXQ07812 192 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 SLC9A3R2Q15599 337 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 COQ5Q5HYK3 327 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 OR10J3Q5JRS4 329 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 RBM48Q5RL73 367 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 TIMM23BQ5SRD1 257 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 AMMECR1LQ6DCA0 310 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 FAM173BQ6P4H8 233 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 TTC33Q6PID6 262 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 DGAT2L6Q6ZPD8 337 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 SSX7Q7RTT5 188 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 ZNF664Q8N3J9 261 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 TMEM156Q8N614 296 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 CMTM2Q8TAZ6 248 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 TEX47Q8TBZ9 253 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 DNAJB3Q8WWF6 145 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 IGF2BP2-AS1Q96M15 143 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 TM2D3Q9BRN9 247 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 DCUN1D5Q9BTE7 237 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 DERL2Q9GZP9 239 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 FBXL15Q9H469 300 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 ASCL3Q9NQ33 180 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 C8orf4Q9NR00 106 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 ZNF230Q9UIE0 474 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 POMPQ9Y244 141 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 SAMHD1Q9Y3Z3 626 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 V9GYQ6 96 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 NOS1P29475 1434 aa2.51□□□□□ -2.01
TRAPPC13-205ENST00000504243 SHANK1Q9Y566 2161 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 IGHV3-43A0A0B4J1X8 118 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 TRAV8-2A0A0B4J237 113 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 A6NED7 52 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 SYNGR2O43760 224 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 PDCD6O75340 191 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 IGKV1D-33P01593 117 aa2.5□□□□□ -2.01
TRAPPC13-205ENST00000504243 IGKV1-33P01594 117 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms