RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PPIAL4CA0A0B4J2A2 164 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 A0A1W2PQ09 198 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 PPIAL4GP0DN37 164 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 SRSF7Q16629 238 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 MOB1BQ7L9L4 216 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 LY6G5BQ8NDX9 201 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 BEST4Q8NFU0 473 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 CGB3P0DN86 165 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 CGB7P0DN87 165 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 OR52W1Q6IF63 320 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 TAF9BQ9HBM6 251 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 KCNIP1Q9NZI2 227 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 ANAPC10Q9UM13 185 aa16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 UBE2J1Q9Y385 318 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE2-206ENST00000503291 GDNFP39905 211 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 ACTBP60709 375 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 ACTG1P63261 375 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 C6orf183Q5T699 404 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 Q6ZS49 121 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 SNAPC3Q92966 411 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 MMP26Q9NRE1 261 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 MGAT4AQ9UM21 535 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 POLR3KQ9Y2Y1 108 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 ABCA2Q9BZC7 2435 aa16.81■□□□□ 0.28
CDC42SE2-206ENST00000503291 TRDCB7Z8K6 153 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 C12orf77C9JDV5 145 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 SCTP09683 121 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 CCL3L1P16619 93 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 SSTR5P35346 364 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 PAX2Q02962 417 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 LYSMD2Q8IV50 215 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 CIARTQ8N365 385 aaPredicted RBP16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 PRR18Q8N4B5 295 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 UBALD1Q8TB05 177 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 TRIM63Q969Q1 353 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 C1orf159Q96HA4 380 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF286AQ9HBT8 521 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 YLPM1P49750 1951 aaKnown RBP16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 KIR2DS1A0A191URI9 304 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 LIPFP07098 398 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 NAT1P18440 290 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 RCVRNP35243 200 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 KIR2DS4P43632 304 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 SSBP1Q04837 148 aaKnown RBP16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 KIR2DS1Q14954 304 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 C17orf58Q2M2W7 97 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 TRAT1Q6PIZ9 186 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 RFESDQ8TAC1 157 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 ARL11Q969Q4 196 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 DACT3Q96B18 629 aaPredicted RBP16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF714Q96N38 554 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 CCDC32Q9BV29 185 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 TAS2R3Q9NYW6 316 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 CALYQ9NYX4 217 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 ANXA10Q9UJ72 324 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 CR1P17927 2039 aa16.8■□□□□ 0.28
CDC42SE2-206ENST00000503291 KBTBD11-OT1A0A1B0GTJ5 212 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 B4DSR2 109 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 C15orf65H3BRN8 121 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 GSTT2P0CG29 244 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 GSTT2BP0CG30 244 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF728P0DKX0 622 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 HLA-DMAP28067 261 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 HMGN3Q15651 99 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF554Q86TJ5 538 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 OPN4Q9UHM6 478 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 AKAP9Q99996 3911 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF729A6NN14 1252 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 ENSAO43768 121 aaKnown RBP16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 IL7P13232 177 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 HLA-DRB3P79483 266 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 TMEM249Q2WGJ8 235 aa16.79■□□□□ 0.28
CDC42SE2-206ENST00000503291 IGHV2-70DA0A0C4DH43 119 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 A0A1W2PPH5 198 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 FABP7O15540 132 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 HBZP02008 142 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 MSMBP08118 114 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 OMGP23515 440 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 DLX6P56179 175 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 ERVFRD-1P60508 538 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 TRIQKQ629K1 86 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 LINC01356Q8N9X3 169 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 OR1L1Q8NH94 360 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 GAL3ST2Q9H3Q3 398 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 TAS2R8Q9NYW2 309 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 CREBBPQ92793 2442 aa16.78■□□□□ 0.28
CDC42SE2-206ENST00000503291 NPIPB11E5RHQ5 1161 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 SPINT2O43291 252 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 ARF6P62330 175 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 C11orf42Q8N5U0 333 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 OR5AP2Q8NGF4 316 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 IL1F10Q8WWZ1 152 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 KIRREL1Q96J84 757 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 DMRTB1Q96MA1 342 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 LINC00574Q9H8X3 128 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 OTOGQ6ZRI0 2925 aa16.77■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF736B4DX44 427 aaPredicted RBP16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 CSF1P09603 554 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 CHRFAM7AQ494W8 412 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGSF11Q5DX21 431 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms