RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BDKRB2P30411 391 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 PPP3R1P63098 170 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 C9orf152Q5JTZ5 239 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 OSR2Q8N2R0 312 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 CCDC107Q8WV48 283 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 RPEQ96AT9 228 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 CREB3L1Q96BA8 519 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 RBMXL1Q96E39 390 aaKnown RBP12.93□□□□□ -0.34
SCLT1-204ENST00000503215 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 PGLYRP3Q96LB9 341 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
SCLT1-204ENST00000503215 PNMA8CA0A1B0GUJ8 204 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 TFAP2AP05549 437 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 SNRNP70P08621 437 aaKnown RBP12.92□□□□□ -0.34
SCLT1-204ENST00000503215 SMIM18P0DKX4 95 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 MYL12AP19105 171 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 PSMD7P51665 324 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 PAX5Q02548 391 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 ST3GAL4Q11206 333 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 HNF4GQ14541 408 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 SLC22A6Q4U2R8 563 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 Q6ZPA2 131 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF554Q86TJ5 538 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 DHRSXQ8N5I4 330 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 OR4F17Q8NGA8 305 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 MYDGFQ969H8 173 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 CPNE2Q96FN4 548 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-204ENST00000503215 AKR1E2Q96JD6 320 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 OR4F4Q96R69 305 aa12.92□□□□□ -0.34
SCLT1-204ENST00000503215 TRBV5-7A0A0A0MS05 114 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 TCRBV4S1A1TA0A5B7 111 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 OOSP1A8MZH6 123 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 H3BUI4 141 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 PIN1P1O15428 100 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 XPNPEP2O43895 674 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 MNDAP41218 407 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 NHLRC3Q5JS37 347 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 ATAD3CQ5T2N8 411 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 TTC23Q5W5X9 447 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 OR14A2Q96R54 314 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
SCLT1-204ENST00000503215 IRGMA1A4Y4 181 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 GPX5O75715 221 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 CSTBP04080 98 aaKnown RBP12.9□□□□□ -0.34
SCLT1-204ENST00000503215 FAM106CPP0CH98 169 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 REG1BP48304 166 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 KCNJ3P48549 501 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 AQP4P55087 323 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 MADCAM1Q13477 382 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 Q499Y3 187 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF329Q86UD4 541 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 MUL1Q969V5 352 aa12.9□□□□□ -0.34
SCLT1-204ENST00000503215 IGHV3-43A0A0B4J1X8 118 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 IGHV3-72A0A0B4J1Y9 119 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 TMEM30CPA0ZSE6 113 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 MT-ND4P03905 459 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 IGHV3-43DP0DP04 118 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 IGLL1P15814 213 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 YIF1BQ5BJH7 314 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 WFDC9Q8NEX5 89 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 NOL4LQ96MY1 436 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-204ENST00000503215 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 MOB4Q9Y3A3 225 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 AMMECR1Q9Y4X0 333 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-204ENST00000503215 HSPE1-MOB4S4R3N1 261 aa12.89□□□□□ -0.35
SCLT1-204ENST00000503215 GTF2F2P13984 249 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 LOXL3P58215 753 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 HES1Q14469 280 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 JAGN1Q8N5M9 183 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 PACRGLQ8N7B6 248 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-204ENST00000503215 SETD9Q8NE22 299 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 OR10X1Q8NGY0 326 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 S100A13Q99584 98 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 BANF2Q9H503 90 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 PSORS1C1Q9UIG5 152 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
SCLT1-204ENST00000503215 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
SCLT1-204ENST00000503215 MRPS28Q9Y2Q9 187 aaKnown RBP12.88□□□□□ -0.35
SCLT1-204ENST00000503215 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 SLC31A2O15432 143 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 IGKV1D-33P01593 117 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 IGKV1-33P01594 117 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 MAS1P04201 325 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 TMEM11P17152 192 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 GZMHP20718 246 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms