RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PHLDA2Q53GA4 152 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 H1FOOQ8IZA3 346 aaPredicted RBP18.48■□□□□ 0.55
PTPN13-205ENST00000502971 LILRB1Q8NHL6 650 aaPredicted RBP18.48■□□□□ 0.55
PTPN13-205ENST00000502971 KIRREL1Q96J84 757 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 SUCNR1Q9BXA5 334 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 PRR13Q9NZ81 148 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 KCNIP1Q9NZI2 227 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 DNAJB11Q9UBS4 358 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 FXYD6-FXYD2A0A087WZ82 144 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 C13orf42A0A1B0GVH6 325 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 PSG2P11465 335 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 GNRHRP30968 328 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 OR3A1P47881 315 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 RND3P61587 244 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 HOXA4Q00056 320 aaPredicted RBP18.47■□□□□ 0.55
PTPN13-205ENST00000502971 PAX5Q02548 391 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 ADAM5Q6NVV9 412 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 CD177Q8N6Q3 437 aa18.47■□□□□ 0.55
PTPN13-205ENST00000502971 METTL8Q9H825 291 aaKnown RBP18.47■□□□□ 0.55
PTPN13-205ENST00000502971 L7N2F9 121 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 CD55P08174 381 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 SLC25A4P12235 298 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 TMEM65Q6PI78 240 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 Q8TCH9 128 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 PPP1R1CQ8WVI7 109 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 SLC5A7Q9GZV3 580 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 GCM1Q9NP62 436 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 RNF7Q9UBF6 113 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 OR2W1Q9Y3N9 320 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 B8ZZF3 427 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 GPR31O00270 319 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 ADAP1O75689 374 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 CXCL2P19875 107 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 TMEM187Q14656 261 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 C11orf87Q6NUJ2 197 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 LRTM2Q8N967 370 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 SECTM1Q8WVN6 248 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 TAF9BQ9HBM6 251 aa18.46■□□□□ 0.55
PTPN13-205ENST00000502971 TRAV39A0A0B4J263 110 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 OOEPA6NGQ2 149 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 SHISA9B4DS77 424 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 ARPC5O15511 151 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 TSC22D2O75157 780 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 OR5AC1P0C628 307 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 SSTR2P30874 369 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 AESQ08117 197 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 LDLRAD3Q86YD5 345 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 BOLLQ8N9W6 283 aaKnown RBP18.45■□□□□ 0.54
PTPN13-205ENST00000502971 OR11L1Q8NGX0 322 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 PPP1R35Q8TAP8 253 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 IL1F10Q8WWZ1 152 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 PLPPR2Q96GM1 343 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 COQ2Q96H96 371 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 C2orf50Q96LR7 162 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 BBC3Q96PG8 261 aaPredicted RBP18.45■□□□□ 0.54
PTPN13-205ENST00000502971 SHARPINQ9H0F6 387 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 KIF25Q9UIL4 384 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 METRNQ9UJH8 293 aa18.45■□□□□ 0.54
PTPN13-205ENST00000502971 CHD3Q12873 2000 aaKnown RBP18.44■□□□□ 0.54
PTPN13-205ENST00000502971 IGKV1D-17A0A075B6S4 117 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 IGKV1D-13A0A0B4J2D9 117 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 NKX2-6A6NCS4 301 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 C17orf100A8MU93 164 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 MPPED1O15442 326 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 CD3EP07766 207 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 IGKV1-13P0DP09 117 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 RPA2P15927 270 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 TLE1Q04724 770 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 KRBOX4Q5JUW0 171 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 ZNF767PQ75MW2 155 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 DMRTC2Q8IXT2 367 aaPredicted RBP18.44■□□□□ 0.54
PTPN13-205ENST00000502971 FAM222BQ8WU58 562 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 SNX22Q96L94 193 aa18.44■□□□□ 0.54
PTPN13-205ENST00000502971 M0R233 179 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 ZNF737O75373 536 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 TNFRSF1AP19438 455 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 TESK1Q15569 626 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 NDUFA5Q16718 116 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 C6orf183Q5T699 404 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 LIAT1Q6ZQX7 453 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 HEXA-AS1Q9H8Q6 139 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 ERRFI1Q9UJM3 462 aaPredicted RBP18.43■□□□□ 0.54
PTPN13-205ENST00000502971 IFNA21P01568 189 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 TFF1P04155 84 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 HOXB5P09067 269 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 PSMB6P28072 239 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 GABRA2P47869 451 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 OPCMLQ14982 345 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 TRAT1Q6PIZ9 186 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 ZNF818PQ6ZRF7 136 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 ZNF546Q86UE3 836 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 CMTM1Q8IZ96 169 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 THAP6Q8TBB0 222 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 CA5BP1Q8WTZ4 195 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 RDH8Q9NYR8 311 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 OR1A1Q9P1Q5 309 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 ITGB1BP2Q9UKP3 347 aa18.43■□□□□ 0.54
PTPN13-205ENST00000502971 FAM208BQ5VWN6 2430 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 C3orf85A0A1B0GTC6 90 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 MPC2O95563 127 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms