RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PLA2G2CQ5R387 149 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF573Q86YE8 665 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TMEM252Q8N6L7 170 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZFP62Q8NB50 900 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 CLEC18CQ8NCF0 446 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 FAM213BQ8TBF2 198 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 GTF3AQ92664 365 aaKnown RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 BCL2L2Q92843 193 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 OR51I2Q9H344 312 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 PLK3Q9H4B4 646 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 SPACA1Q9HBV2 294 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 KLF2Q9Y5W3 355 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 A0A0G2JRQ6 117 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TNFSF15O95150 251 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 HLA-DRB3P79483 266 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF266Q14584 549 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 SLC10A1Q14973 349 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 AWAT1Q58HT5 328 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 FBXW9Q5XUX1 488 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF324BQ6AW86 544 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF880Q6PDB4 577 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 WDR86Q86TI4 376 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 CMTM1Q8IZ96 169 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 OR5D13Q8NGL4 314 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 WDYHV1Q96HA8 205 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 RIMS4Q9H426 269 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-204ENST00000501271 PLEKHF2Q9H8W4 249 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 GP6Q9HCN6 339 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TAAR3PQ9P1P4 343 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF175Q9Y473 711 aa8.39□□□□□ -1.07
CLIP1-204ENST00000501271 TRAV39A0A0B4J263 110 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 CST7O76096 145 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 CELA3BP08861 270 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ID3Q02535 119 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 AVPI1Q5T686 147 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 HES3Q5TGS1 186 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 H1FOOQ8IZA3 346 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ABHD14BQ96IU4 210 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 CLCC1Q96S66 551 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ABHD14AQ9BUJ0 271 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 PKIBQ9C010 78 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR1A1Q9P1Q5 309 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR2W1Q9Y3N9 320 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ASPMQ8IZT6 3477 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 J3QT63 122 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF44P15621 663 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 EPHA1P21709 976 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 F2RP25116 425 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 DYNLT3P51808 116 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 VAMP2P63027 116 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 HMGN3Q15651 99 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 Q6P435 159 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR2G3Q8NGZ4 309 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR51H1Q8NH63 302 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 OR10J5Q8NHC4 309 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 FER1L6-AS2Q96M78 137 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 CABLES2Q9BTV7 478 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 RPS10P5Q9NQ39 176 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 ERRFI1Q9UJM3 462 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-204ENST00000501271 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
CLIP1-204ENST00000501271 GTF3C1Q12789 2109 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 A0A1W2PR80 420 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 CDRT15L2A8MXV6 281 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 M0R296 226 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-204ENST00000501271 CHST1O43916 411 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 CD46P15529 392 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IL1F10Q8WWZ1 152 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IL22RA2Q969J5 263 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 C14orf79Q96F83 325 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IP6K3Q96PC2 410 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 C20orf24Q9BUV8 137 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IFT22Q9H7X7 185 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 PCNX2A6NKB5 2137 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 KIAA2026Q5HYC2 2103 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 TRGV5A0A0B4J1U4 118 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 DEGS1O15121 323 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IGLV2-14P01704 120 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 SNRNP70P08621 437 aaKnown RBP8.37□□□□□ -1.07
CLIP1-204ENST00000501271 PSG2P11465 335 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 PAX6P26367 422 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 PAX9P55771 341 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms