RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 I3L521 148 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 SLC16A6O15403 523 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 SULT1B1O43704 296 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 IGF1P05019 195 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 CD1BP29016 333 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 SOX6P35712 828 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 CCR9P51686 369 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 GNB1P62873 340 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 TMED1Q13445 227 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 KIAA0141Q14154 515 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-212ENST00000498540 DOC2BQ14184 412 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 IL13RA2Q14627 380 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 FAM27D1Q5T7N8 215 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 OR1N2Q8NGR9 330 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 RNFT2Q96EX2 444 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 PELI1Q96FA3 418 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 OR5B12Q96R08 314 aa11.42□□□□□ -0.58
TRAF4-212ENST00000498540 STARD9Q9P2P6 4700 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 DAPL1A0PJW8 107 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 C15orf65H3BRN8 121 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 J3QRE1 110 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 GABRPO00591 440 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 SPNP16150 400 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 KCNJ3P48549 501 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF616Q08AN1 781 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ATP6AP1Q15904 470 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 KCTD20Q7Z5Y7 419 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 LINC00311Q8N616 119 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF491Q8N8L2 437 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 SUMF2Q8NBJ7 301 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 PXT1Q8NFP0 134 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 DCUN1D4Q92564 292 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 RFKQ969G6 155 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 UBE2E2Q96LR5 201 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 CITED4Q96RK1 184 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 DPCDQ9BVM2 203 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-212ENST00000498540 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF580Q9UK33 172 aa11.41□□□□□ -0.58
TRAF4-212ENST00000498540 TRIM64CA6NLI5 447 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 J3QLW9 94 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 SDCBPO00560 298 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-212ENST00000498540 SLC31A2O15432 143 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF19P17023 458 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 RUNX1Q01196 453 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 ALKBH1Q13686 389 aaKnown RBP11.4□□□□□ -0.58
TRAF4-212ENST00000498540 PARP16Q8N5Y8 322 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 CCDC197Q8NCU1 140 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 OR8H1Q8NGG4 311 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 OR5D14Q8NGL3 314 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 TNFAIP8L1Q8WVP5 186 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 ARL11Q969Q4 196 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 C4orf36Q96KX1 117 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 GABARAPL3Q9BY60 117 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 RIBC2Q9H4K1 309 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF107Q9UII5 783 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-212ENST00000498540 VSIG4Q9Y279 399 aa11.4□□□□□ -0.58
TRAF4-212ENST00000498540 G3V318 75 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 OVOL1O14753 267 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 GYG2O15488 501 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 ATP8B1O43520 1251 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 SAP30O75446 220 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 OR5H8P0DN80 308 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 GP9P14770 177 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 MYF6P23409 242 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 IL3RAP26951 378 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
TRAF4-212ENST00000498540 RSU1Q15404 277 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 ADAMTSL5Q6ZMM2 481 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 ZDHHC13Q8IUH4 622 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 SERPINA12Q8IW75 414 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 OR51A2Q8NGJ7 313 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 OR52M1Q8NGK5 317 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 CCDC107Q8WV48 283 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 ALX4Q9H161 411 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-212ENST00000498540 WSB1Q9Y6I7 421 aa11.39□□□□□ -0.59
TRAF4-212ENST00000498540 TMEM30CPA0ZSE6 113 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 HTR3BO95264 441 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 GZMHP20718 246 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 VHLP40337 213 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 SLURP1P55000 103 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 GABPB1Q06547 395 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-212ENST00000498540 DNAL1Q4LDG9 190 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 TMEM65Q6PI78 240 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 AMIGO2Q86SJ2 522 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 SATL1Q86VE3 508 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 ZNF439Q8NDP4 499 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 DLX4Q92988 240 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-212ENST00000498540 GPER1Q99527 375 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms