RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PSG2P11465 335 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 RPS2P15880 293 aaKnown RBP6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 RCC1P18754 421 aaPredicted RBP6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 UCP3P55916 312 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 H2BFSP57053 126 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PIGPP57054 158 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SUPT4H1P63272 117 aaKnown RBP6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 DHODHQ02127 395 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 EDDM3AQ14507 147 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 CDSNQ15517 529 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 C4orf17Q53FE4 359 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PHLDA2Q53GA4 152 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 KRBOX4Q5JUW0 171 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 FAM209AQ5JX71 171 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 C6orf183Q5T699 404 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SLC35E4Q6ICL7 350 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 CLEC18BQ6UXF7 455 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 GAPTQ8N292 157 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 C9orf62Q8N4C0 152 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 ZNF565Q8N9K5 539 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 ZBTB8BQ8NAP8 495 aaPredicted RBP6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 OR10J5Q8NHC4 309 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PPP1R35Q8TAP8 253 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 LINC01560Q8TB33 94 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 Q8TCH9 128 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SECTM1Q8WVN6 248 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 IL1F10Q8WWZ1 152 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 NEUROG1Q92886 237 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 ERGIC1Q969X5 290 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PIK3IP1Q96FE7 263 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 COQ2Q96H96 371 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 RTBDNQ9BSG5 229 aaPredicted RBP6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 EGLN1Q9GZT9 426 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 NAA60Q9H7X0 242 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SAP30LQ9HAJ7 183 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SLC2A9Q9NRM0 540 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PLSCR3Q9NRY6 295 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 DECR2Q9NUI1 292 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 PIPOXQ9P0Z9 390 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 RNF7Q9UBF6 113 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 SHPKQ9UHJ6 478 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 KIF25Q9UIL4 384 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 USP24Q9UPU5 2620 aa6.78□□□□□ -1.32
PDZRN3-212ENST00000498048 TPRP12270 2363 aaKnown RBP6.77□□□□□ -1.32
PDZRN3-212ENST00000498048 ACACBO00763 2458 aa6.77□□□□□ -1.32
PDZRN3-212ENST00000498048 IGKV1D-17A0A075B6S4 117 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 FXYD6-FXYD2A0A087WZ82 144 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 TRAV39A0A0B4J263 110 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 IGKV1-6A0A0C4DH72 117 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 OOEPA6NGQ2 149 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 TUBAL3A6NHL2 446 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 LRRC30A6NM36 301 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 E7EQL1 145 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 HSPA12AO43301 675 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 TUSC2O75896 110 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 RGS11O94810 467 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 OR2A4O95047 310 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 CYB5R3P00387 301 aaPredicted RBP6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 GNLYP22749 145 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 LMO1P25800 156 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 SERPINF1P36955 418 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 CFHR2P36980 270 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 SNRPD2P62316 118 aaKnown RBP6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 ANKRD55Q3KP44 614 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 STUMQ69YW2 141 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 TRAT1Q6PIZ9 186 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 DHRS11Q6UWP2 260 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 GSG1LQ6UXU4 331 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 C5orf24Q7Z6I8 188 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 H1FOOQ8IZA3 346 aaPredicted RBP6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 CD177Q8N6Q3 437 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 GALNT11Q8NCW6 608 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 UBALD1Q8TB05 177 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 OR2A7Q96R45 310 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 RSRP1Q9BUV0 290 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 SLC5A7Q9GZV3 580 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 GCM1Q9NP62 436 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 PRR13Q9NZ81 148 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 KCNIP1Q9NZI2 227 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 OR1A1Q9P1Q5 309 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 FBXO9Q9UK97 447 aaPredicted RBP6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 KCNS2Q9ULS6 477 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 PPP1R3CQ9UQK1 317 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 ZZEF1O43149 2961 aa6.77□□□□□ -1.33
PDZRN3-212ENST00000498048 TET2Q6N021 2002 aaPredicted RBP6.76□□□□□ -1.33
PDZRN3-212ENST00000498048 TRBV6-7A0A0A0MS04 114 aa6.76□□□□□ -1.33
PDZRN3-212ENST00000498048 IGKV1D-13A0A0B4J2D9 117 aa6.76□□□□□ -1.33
PDZRN3-212ENST00000498048 C5orf51A6NDU8 294 aa6.76□□□□□ -1.33
PDZRN3-212ENST00000498048 DBX1A6NMT0 343 aa6.76□□□□□ -1.33
PDZRN3-212ENST00000498048 C12orf77C9JDV5 145 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms