RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 OR4K17Q8NGC6 315 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 MITD1Q8WV92 249 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 DDIT4LQ96D03 193 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 PITX2Q99697 317 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 APOL4Q9BPW4 351 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 ZNF251Q9BRH9 671 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 FBXL15Q9H469 300 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 FAM206AQ9NX38 181 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 TAS2R9Q9NYW1 312 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 CLEC2DQ9UHP7 191 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 FBXL3Q9UKT7 428 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 CEP170Q5SW79 1584 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 GBF1Q92538 1859 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 TMEM131Q92545 1883 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 COL4A1P02462 1669 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 IGHV3OR15-7A0A075B7D8 119 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 IGSF23A1L1A6 192 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 MGAT4DA6NG13 374 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 ARGFXA6NJG6 315 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 FAM183AA6NL82 134 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 SIGLEC16A6NMB1 481 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 C8orf87E5RJ46 101 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 E7EWF7 191 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 hCG_2039718K7EN88 272 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 CDIPTO14735 213 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 GIMD1P0DJR0 217 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 GTF2H1P32780 548 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 RANBP1P43487 201 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 DNASE1L1P49184 302 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 TRAM1Q15629 374 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 FAM229BQ4G0N7 80 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 HBMQ6B0K9 141 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 DGAT2L6Q6ZPD8 337 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 OLIG3Q7RTU3 272 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 SUN5Q8TC36 379 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 CD200R1Q8TD46 325 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 DCANP1Q8TF63 244 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 CASTOR1Q8WTX7 329 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 OR5P2Q8WZ92 322 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 CLDN23Q96B33 292 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 LRRC39Q96DD0 335 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 ZNF625Q96I27 306 aaPredicted RBP0.8□□□□□ -2.28
SMC4-227ENST00000497984 HINT2Q9BX68 163 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 BZW2Q9Y6E2 419 aaKnown RBP0.8□□□□□ -2.28
SMC4-227ENST00000497984 COL18A1P39060 1754 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 PTPRKQ15262 1439 aa0.8□□□□□ -2.28
SMC4-227ENST00000497984 MIA3Q5JRA6 1907 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 ARAP3Q8WWN8 1544 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 CR1P17927 2039 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 ADAMTSL3P82987 1691 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 I3L4J1 428 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 FGF16O43320 207 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 LTAP01374 205 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 GZMBP10144 247 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 SPNP16150 400 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 ZNF7P17097 686 aaPredicted RBP0.79□□□□□ -2.28
SMC4-227ENST00000497984 PYCR1P32322 319 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 MAGEA3P43357 314 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 RAB2AP61019 212 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 TSPAN31Q12999 210 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 TRIP13Q15645 432 aaPredicted RBP0.79□□□□□ -2.28
SMC4-227ENST00000497984 CAVIN4Q5BKX8 364 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 LAMTOR1Q6IAA8 161 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 FAM183BPQ6ZVS7 135 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 ZFAND2AQ8N6M9 145 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 ZNF563Q8TA94 476 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 SPPL2BQ8TCT7 592 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 PDCD6IPQ8WUM4 868 aaKnown RBP0.79□□□□□ -2.28
SMC4-227ENST00000497984 PRSS27Q9BQR3 290 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 EBPLQ9BY08 206 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 POTEKPQ9BYX7 375 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 TMBIM4Q9HC24 238 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 TAS2R13Q9NYV9 303 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 RBMX2Q9Y388 322 aaKnown RBP0.79□□□□□ -2.28
SMC4-227ENST00000497984 MTCH2Q9Y6C9 303 aa0.79□□□□□ -2.28
SMC4-227ENST00000497984 LAMB2P55268 1798 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 TRAV8-2A0A0B4J237 113 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 A0A0J9YX75 114 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 A8MWP6 167 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 F8VP50 259 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 EPPINO95925 133 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 CRYGDP07320 174 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 CPMP14384 443 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 CBX5P45973 191 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 INPP1P49441 399 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 AQP5P55064 265 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 MP68P56378 58 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 HTR4Q13639 388 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 VAMP3Q15836 100 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 SDIM1Q6ZPB5 146 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 CDRT4Q8N9R6 151 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 TMBIM1Q969X1 311 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 CIDECQ96AQ7 238 aaPredicted RBP0.78□□□□□ -2.28
SMC4-227ENST00000497984 CAPZA3Q96KX2 299 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 TAPBPLQ9BX59 468 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 PRRG3Q9BZD7 231 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 IFT46Q9NQC8 304 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 NXT1Q9UKK6 140 aaKnown RBP0.78□□□□□ -2.28
SMC4-227ENST00000497984 AMMECR1Q9Y4X0 333 aaPredicted RBP0.78□□□□□ -2.28
SMC4-227ENST00000497984 HEY1Q9Y5J3 304 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms