RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 ANKRD65E5RJM6 399 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 CAPGP40121 348 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 CCDC58Q4VC31 144 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZNF529Q6P280 563 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 LINC00596Q86U02 117 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 LINC00311Q8N616 119 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR13A1Q8NGR1 328 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR5AK2Q8NH90 309 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 CHCHD6Q9BRQ6 235 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 RAB9BQ9NP90 201 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 ING3Q9NXR8 418 aa13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-207ENST00000497251 E9PI62 339 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 CCL24O00175 119 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 CD2P06729 351 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 ELANEP08246 267 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 IL3RAP26951 378 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 CDX1P47902 265 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 FOXE3Q13461 319 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 MED21Q13503 144 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 KIR2DS1Q14954 304 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 RSU1Q15404 277 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 CXorf66Q5JRM2 361 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 TMPRSS11AQ6ZMR5 421 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 C8orf86Q6ZUL3 223 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 RNF144BQ7Z419 303 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR2T10Q8NGZ9 312 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 NOL4LQ96MY1 436 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 NR1H4Q96RI1 486 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 GPER1Q99527 375 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 ABCG5Q9H222 651 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 IL36GQ9NZH8 169 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-207ENST00000497251 HSD17B6O14756 317 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 TXNL1O43396 289 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 ORC5O43913 435 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 ZNF780AO75290 641 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 MYL12AP19105 171 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 CD1BP29016 333 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 ETV1P50549 477 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 C9orf66Q5T8R8 295 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 RPL22L1Q6P5R6 122 aaKnown RBP13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR5M8Q8NGP6 311 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 MRGPRDQ8TDS7 321 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 TNFAIP8L1Q8WVP5 186 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 PDCD1LG2Q9BQ51 273 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 SORL1Q92673 2214 aa13.27□□□□□ -0.29
TRAPPC3-207ENST00000497251 IGHV1-3A0A0C4DH29 117 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 HSPB6O14558 160 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR5H8P0DN80 308 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 HNF4GQ14541 408 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 STEAP3Q658P3 488 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR52N1Q8NH53 320 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 RFESDQ8TAC1 157 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 FBLIM1Q8WUP2 373 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 TSEN15Q8WW01 171 aaKnown RBP13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 EAF1Q96JC9 268 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 DPCDQ9BVM2 203 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 CNOT2Q9NZN8 540 aaKnown RBP13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 DNAH9Q9NYC9 4486 aa13.26□□□□□ -0.29
TRAPPC3-207ENST00000497251 TMEM30CPA0ZSE6 113 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 NCBP2LA6PVI3 153 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 CSTBP04080 98 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 GPR12P47775 334 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 GPR50Q13585 617 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 MPV17LQ2QL34 196 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 UTF1Q5T230 341 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 MOB3BQ86TA1 216 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 Q8N6K4 173 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 GPR148Q8TDV2 347 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 METTL9Q9H1A3 318 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 BABAM2Q9NXR7 383 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 ST3GAL6Q9Y274 331 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 U3KQK5 164 aa13.25□□□□□ -0.29
TRAPPC3-207ENST00000497251 GABRPO00591 440 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 MOSP00540 346 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 GNAO1P09471 354 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 SSTR5P35346 364 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 GNG10P50151 68 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 INSL3P51460 131 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms