RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ABCA1O95477 2261 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 KIF26BQ2KJY2 2108 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 IGLV4-3A0A075B6K6 122 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 TRAV8-4A0A0B4J246 113 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 A0A0B4J2A0 478 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 CENPVL3A0A0U1RRI6 287 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 A0A1W2PRG6 482 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 GOLGA6L4A6NEF3 574 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 J3QT63 122 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PSMD12O00232 456 aaPredicted RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 AGPAT2O15120 278 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 CA11O75493 328 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 ZFAND5O76080 213 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC25A27O95847 323 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 P01737 135 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 HPNP05981 417 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SNRPAP09012 282 aaKnown RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 LMO2P25791 158 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 RPL12P30050 165 aaKnown RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 ALDH3A1P30838 453 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PYCR1P32322 319 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SSTR5P35346 364 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 GGT2P36268 569 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 MAGEA12P43365 314 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 NDUFA8P51970 172 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 CDKN2DP55273 166 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PRR3P79522 188 aaKnown RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 FMODQ06828 376 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 BAXQ07812 192 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PPP1R1AQ13522 171 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR2F1Q13607 317 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 LRRC75BQ2VPJ9 315 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 ADAMTSL4-AS1Q5T5F5 129 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SYT6Q5T7P8 510 aaPredicted RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 LCN12Q6JVE5 192 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 WDR74Q6RFH5 385 aaPredicted RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 LGI3Q8N145 548 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 GPD1LQ8N335 351 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 GATD1Q8NB37 220 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 C11orf72Q8NBR9 251 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR11L1Q8NGX0 322 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR6K3Q8NGY3 331 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR6N1Q8NGY5 312 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 CCDC26Q8TAB7 109 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 STOML3Q8TAV4 291 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PPCDCQ96CD2 204 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 OR10C1Q96KK4 312 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 ZIM3Q96PE6 472 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 PSMB7Q99436 277 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 TEAD3Q99594 435 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SH3GL3Q99963 347 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 DHRS9Q9BPW9 319 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SLIRPQ9GZT3 109 aaKnown RBP2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SRMSQ9H3Y6 488 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 TRABDQ9H4I3 376 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 C12orf4Q9NQ89 552 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SHPKQ9UHJ6 478 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 RAB26Q9ULW5 256 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC7A11Q9UPY5 501 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 MOKQ9UQ07 419 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 ARL5AQ9Y689 179 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC22A7Q9Y694 548 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 CEP192Q8TEP8 1941 aa2.77□□□□□ -1.97
EXOSC3-208ENST00000496910 TRAV39A0A0B4J263 110 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 DAPL1A0PJW8 107 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 METTL15A6NJ78 407 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SYCE1LA8MT33 242 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 UBDO15205 165 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 KLRC4O43908 158 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 NPIPB7O75200 414 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RDH16O75452 317 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RP2O75695 350 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 DUS4LO95620 317 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC35G6P0C7Q6 338 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 UCHL3P15374 230 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ALOX5APP20292 161 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SLCO1A2P46721 670 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 FGF8P55075 233 aaPredicted RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RWDD2BP57060 319 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 PFN3P60673 137 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SPCS3P61009 180 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RPS21P63220 83 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ARG2P78540 354 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 REG3AQ06141 175 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 KRR1Q13601 381 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 PTGES3Q15185 160 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF630Q2M218 657 aaPredicted RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF876PQ49A33 203 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 C1orf146Q5VVC0 180 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ANKRD22Q5VYY1 191 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 KCTD16Q68DU8 428 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM42Q69YG0 159 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 DHRS4L2Q6PKH6 230 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM131AQ6UXB0 335 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 DNM1P46Q6ZS02 220 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM231DQ6ZW35 169 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC51BQ86UW2 128 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms