RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 IQGAP2Q13576 1575 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 C2orf83Q53S99 150 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 ISOC2Q96AB3 205 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 C4orf45Q96LM5 186 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 OTORQ9NRC9 128 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 BEX4Q9NWD9 120 aaPredicted RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 WSB1Q9Y6I7 421 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 MYH4Q9Y623 1939 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ZNF593O00488 134 aaPredicted RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 LEPROTO15243 131 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ERGP11308 486 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 C16orf82Q7Z2V1 217 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CYB561A3Q8NBI2 242 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 NUDT8Q8WV74 236 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SLC25A22Q9H936 323 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 MYH1P12882 1939 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 TMEM150BA6NC51 233 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 M0R2P5 195 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 RRHO14718 337 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 TAX1BP3O14907 124 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 MMP23AO75900 390 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 PRSS23O95084 383 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 FUT3P21217 361 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 HOXA6P31267 233 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CD70P32970 193 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SSTR5P35346 364 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ADRA1AP35348 466 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 TMEM50BP56557 158 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 MMDQ15546 238 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 OR5AN1Q8NGI8 311 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ZNF98A6NK75 572 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 H3BSH0 61 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 HOXC11O43248 304 aaPredicted RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 LEPROTL1O95214 131 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CLEC18BQ6UXF7 455 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 C10orf35Q96D05 121 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SLC25A19Q9HC21 320 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 GPR45Q9Y5Y3 372 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 MYH2Q9UKX2 1941 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 TRAV8-6A0A0B4J262 113 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SOCS3O14543 225 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 IL13P35225 146 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 GUSBP11Q6P575 273 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ZPLD1Q8TCW7 415 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 DSCR8Q96T75 97 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 EBF4Q9BQW3 602 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CXCL16Q9H2A7 254 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 TSPAN2O60636 221 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CA5AP35218 305 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 LPAR6P43657 344 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CCL11P51671 97 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 CLEC20AQ6ZU45 233 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 OR52B4Q8NGK2 314 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 C16orf52Q8NHV5 167 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ST6GAL2Q96JF0 529 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 A0A1W2PPI3 338 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 HYPMO75409 117 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 PFN1P07737 140 aaKnown RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 ANOS1P23352 680 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SCAMP5Q8TAC9 235 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 EEF1AKMT3Q96AZ1 226 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 C5orf30Q96GV9 206 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 ZNF300Q96RE9 604 aaPredicted RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 RNF7Q9UBF6 113 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 VAX2Q9UIW0 290 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 OR51B2Q9Y5P1 312 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 IQCF6A8MYZ5 107 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 B4GALT3O60512 393 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 GPR6P46095 362 aaPredicted RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 FLYWCH2Q96CP2 140 aaKnown RBP5.17□□□□□ -1.58
USF3-204ENST00000496826 ADAMTS13Q76LX8 1427 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 A2MP01023 1474 aa5.17□□□□□ -1.58
USF3-204ENST00000496826 SYS1-DBNDD2H3BUS1 97 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 NDUFS5O43920 106 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GNLYP22749 145 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 DUSP28Q4G0W2 176 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 RIPPLY2Q5TAB7 128 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GOLT1AQ6ZVE7 132 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 PLA2G12BQ9BX93 195 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 ZNF696Q9H7X3 374 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 ZNF430Q9H8G1 570 aaPredicted RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 APOBEC3GQ9HC16 384 aaKnown RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 PLA2G3Q9NZ20 509 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 MYH15Q9Y2K3 1946 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 WDR97A6NE52 1622 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 WDR62O43379 1518 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 CAPZBP47756 277 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 CDK5R1Q15078 307 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 SMN1Q16637 294 aaKnown RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GPATCH8Q9UKJ3 1502 aaKnown RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 ASXL2Q76L83 1435 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 A0A1B0GVG6 124 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 INS-IGF2F8WCM5 200 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 EIF3GO75821 320 aaKnown RBP eCLIP5.16□□□□□ -1.58
USF3-204ENST00000496826 INSP01308 110 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 IGHG3P01860 377 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 CD52P31358 61 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms