RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MCRIP1C9JLW8 97 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 ORC5O43913 435 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 MT-ND4P03905 459 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 GAPDHP04406 335 aaKnown RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 AMY1AP04745 511 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 AMY2AP04746 511 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 CD1AP06126 327 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 SNRNP70P08621 437 aaKnown RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 FSTP19883 344 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 SSTR5P35346 364 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 GNG10P50151 68 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 HES1Q14469 280 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 OGFRL1Q5TC84 451 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 GLIPR1L1Q6UWM5 242 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 OR8H3Q8N146 312 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 JAGN1Q8N5M9 183 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 DRAM1Q8N682 238 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 NANOGP1Q8N7R0 232 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 BPIFB6Q8NFQ5 453 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 CCDC107Q8WV48 283 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 MUL1Q969V5 352 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 MRPS28Q9Y2Q9 187 aaKnown RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 TSSC4Q9Y5U2 329 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-214ENST00000496043 PNMA8CA0A1B0GUJ8 204 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 A0A1W2PP11 408 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 A0A1W2PRX2 142 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-214ENST00000496043 C15orf65H3BRN8 121 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 MYL12BO14950 172 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 MAS1P04201 325 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 GNAO1P09471 354 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 TMEM11P17152 192 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 CELP19835 753 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 WNT4P56705 351 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 DOC2BQ14184 412 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 HNF4GQ14541 408 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 FBLN7Q53RD9 439 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 ZNF497Q6ZNH5 498 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 WFDC9Q8NEX5 89 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 OR4X2Q8NGF9 303 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 OR56B4Q8NH76 319 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 FBLIM1Q8WUP2 373 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 THRSPQ92748 146 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 OR14A2Q96R54 314 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 RAB9BQ9NP90 201 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 ERGIC3Q9Y282 383 aa10.14□□□□□ -0.79
PTPRF-214ENST00000496043 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 AIPO00170 330 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 CCRL2O00421 344 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 SDCBPO00560 298 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-214ENST00000496043 CASQ2O14958 399 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-214ENST00000496043 PF4V1P10720 104 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 CD33P20138 364 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 ZNF816Q0VGE8 651 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-214ENST00000496043 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 AWAT2Q6E213 333 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 AHSA2Q719I0 299 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 REC114Q7Z4M0 266 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 MOB3BQ86TA1 216 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 LINC00311Q8N616 119 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 SGCDQ92629 289 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 MYDGFQ969H8 173 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 DERL3Q96Q80 235 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 VCXQ9H320 206 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 ETAA1Q9NY74 926 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 TRAPPC2LQ9UL33 140 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 PEX16Q9Y5Y5 336 aa10.13□□□□□ -0.79
PTPRF-214ENST00000496043 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 HSD17B6O14756 317 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 PIN1P1O15428 100 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 SPINT2O43291 252 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 FGF16O43320 207 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 CA11O75493 328 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 GLAP06280 429 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 FUT3P21217 361 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 IL3RAP26951 378 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 MAPK3P27361 379 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-214ENST00000496043 LOXL3P58215 753 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 EBI3Q14213 229 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 Q3ZCU0 254 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 SYT6Q5T7P8 510 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-214ENST00000496043 RAB12Q6IQ22 244 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 TFAP2CQ92754 450 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 UQCC2Q9BRT2 126 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 SELENOIQ9C0D9 397 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 BANF2Q9H503 90 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 GFOD1Q9NXC2 390 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 RCC2Q9P258 522 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms