RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 PARP16Q8N5Y8 322 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 OR1N2Q8NGR9 330 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
TMEM53-209ENST00000495630 ST6GALNAC6Q969X2 333 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 UBE2E2Q96LR5 201 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 KCTD7Q96MP8 289 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 CIB1Q99828 191 aa13.68□□□□□ -0.22
TMEM53-209ENST00000495630 SORL1Q92673 2214 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 J3QLW9 94 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 OR8U8P0C7N1 319 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 ZNF19P17023 458 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 RUNX1Q01196 453 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 FAM71E2Q8N5Q1 922 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 RTN4IP1Q8WWV3 396 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-209ENST00000495630 PELI1Q96FA3 418 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 CPNE2Q96FN4 548 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-209ENST00000495630 HSPB9Q9BQS6 159 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 RIBC2Q9H4K1 309 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 PALMDQ9NP74 551 aa13.67□□□□□ -0.22
TMEM53-209ENST00000495630 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 I3L521 148 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 IL3RAP26951 378 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 F2RL1P55085 397 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-209ENST00000495630 ZSCAN26Q16670 478 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 TMEM65Q6PI78 240 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 ASCL4Q6XD76 172 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 SUMF2Q8NBJ7 301 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 ARL11Q969Q4 196 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-209ENST00000495630 GABARAPL3Q9BY60 117 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 IFT22Q9H7X7 185 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 ZMAT4Q9H898 229 aa13.66□□□□□ -0.22
TMEM53-209ENST00000495630 SDCBPO00560 298 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-209ENST00000495630 MAGEB3O15480 346 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 TXNL1O43396 289 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 ORC5O43913 435 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 FASP25445 335 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 ZNF616Q08AN1 781 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 RSU1Q15404 277 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 PIGYQ3MUY2 71 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 Q3ZCU0 254 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 SLC25A30Q5SVS4 291 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 ACBD7Q8N6N7 88 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 MRPL48Q96GC5 212 aaKnown RBP13.65□□□□□ -0.22
TMEM53-209ENST00000495630 MYCBPQ99417 103 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-209ENST00000495630 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 VSIG4Q9Y279 399 aa13.65□□□□□ -0.22
TMEM53-209ENST00000495630 TMEM30CPA0ZSE6 113 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 ZNF736B4DX44 427 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-209ENST00000495630 RAB3AP20336 220 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 PPIFP30405 207 aaKnown RBP13.64□□□□□ -0.23
TMEM53-209ENST00000495630 GALEQ14376 348 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 ASPHD1Q5U4P2 390 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 ZNF529Q6P280 563 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 OVCH2Q7RTZ1 564 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 SATL1Q86VE3 508 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 C4orf36Q96KX1 117 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 CITED4Q96RK1 184 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 GPER1Q99527 375 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 KLK15Q9H2R5 256 aa13.64□□□□□ -0.23
TMEM53-209ENST00000495630 RYR2Q92736 4967 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 DYNC2H1Q8NCM8 4307 aaKnown RBP13.63□□□□□ -0.23
TMEM53-209ENST00000495630 HUWE1Q7Z6Z7 4374 aaKnown RBP13.63□□□□□ -0.23
TMEM53-209ENST00000495630 TMEM212A6NML5 194 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 GABRPO00591 440 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 OVOL1O14753 267 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 HTR3BO95264 441 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 FRMD6-AS1P0C7T7 363 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 VHLP40337 213 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 ZNF137PP52743 207 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 NHLRC3Q5JS37 347 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 AMIGO2Q86SJ2 522 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 OR10K1Q8NGX5 313 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 DCUN1D4Q92564 292 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 GNB4Q9HAV0 340 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 ZNF107Q9UII5 783 aaPredicted RBP13.63□□□□□ -0.23
TMEM53-209ENST00000495630 DHDHQ9UQ10 334 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 ST3GAL6Q9Y274 331 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 EXOGQ9Y2C4 368 aaKnown RBP13.63□□□□□ -0.23
TMEM53-209ENST00000495630 AP4S1Q9Y587 144 aa13.63□□□□□ -0.23
TMEM53-209ENST00000495630 FAM90A10PA6NDY2 464 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 OR7C1O76099 320 aaPredicted RBP13.62□□□□□ -0.23
TMEM53-209ENST00000495630 IGLV1-40P01703 118 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 SLC25A48Q6ZT89 311 aaKnown RBP13.62□□□□□ -0.23
TMEM53-209ENST00000495630 OR52N1Q8NH53 320 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 OR5AK2Q8NH90 309 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 SLC7A6OSQ96CW6 309 aaPredicted RBP13.62□□□□□ -0.23
TMEM53-209ENST00000495630 IMPAD1Q9NX62 359 aa13.62□□□□□ -0.23
TMEM53-209ENST00000495630 GAR1Q9NY12 217 aaKnown RBP13.62□□□□□ -0.23
TMEM53-209ENST00000495630 MT-ND4P03905 459 aa13.61□□□□□ -0.23
TMEM53-209ENST00000495630 SPNP16150 400 aa13.61□□□□□ -0.23
TMEM53-209ENST00000495630 RAB9AP51151 201 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms