RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	ABHD14B	Q96IU4	210 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	GGACT	Q9BVM4	153 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DOK5	Q9P104	306 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	LRFN1	Q9P244	771 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A10P	A6NDY2	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A18P	A6NE21	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A16P	A6NEW6	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A20P	A6NIJ5	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A8P	A6NJQ4	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A7P	A6NKC0	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CD300LB	A8K4G0	201 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A22P	A8MWA6	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A12P	A8MX19	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A5P	A8MXJ8	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A23P	A8MXZ1	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PATE3	B3GLJ2	98 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A15P	P0C7V4	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A13P	P0C7W8	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A14P	P0C7W9	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM90A24P	P0C7X0	464 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PLP2	Q04941	152 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	LILRB2	Q8N423	598 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	OR8G5	Q8NG78	346 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	UBALD1	Q8TB05	177 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	SIGLEC12	Q96PQ1	595 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	RSG1	Q9BU20	258 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	GAR1	Q9NY12	217 aa	Known RBP	11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CRIM1	Q9NZV1	1036 aa		11.5	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TRAV39	A0A0B4J263	110 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DUXB	A0A1W2PPF3	345 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	LRRC3C	A6NJW4	275 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C3orf80	F5H4A9	247 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071		H0Y980	276 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	NAPSA	O96009	420 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PSG2	P11465	335 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CEACAM21	Q3KPI0	293 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	SPINK14	Q6IE38	97 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C17orf78	Q8N4C9	275 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	OR5D13	Q8NGL4	314 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CLDN23	Q96B33	292 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DEPP	Q9NTK1	212 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PPP1R3C	Q9UQK1	317 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ANKRD30BL	A7E2S9	258 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CYTIP	O60759	359 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	SYNGR4	O95473	234 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	NGF	P01138	241 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CXCL1	P09341	107 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	METTL15P1	P0C7V9	234 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	LMO1	P25800	156 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DUSP3	P51452	185 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FGF8	P55075	233 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	HLA-DRB3	P79483	266 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ZNF506	Q5JVG8	444 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ZNF787	Q6DD87	383 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	SPSB4	Q96A44	273 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PFDN5	Q99471	154 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	REPIN1	Q9BWE0	567 aa	Known RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C11orf1	Q9H5F2	150 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CACNG5	Q9UF02	275 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CD200	P41217	278 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ELOB	Q15370	118 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	KRTAP27-1	Q3LI81	207 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C1QL4	Q86Z23	238 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CLDND2	Q8NHS1	167 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	GPR146	Q96CH1	333 aa		11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ZNF552	Q9H707	407 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	BOK	Q9UMX3	212 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-222	ENST00000495071	IGKV1-6	A0A0C4DH72	117 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	MMP9	P14780	707 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TUSC5	Q8IXB3	177 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	OR2W1	Q9Y3N9	320 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FREM1	Q5H8C1	2179 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PPP1R2P9	O14990	202 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	HOXA5	P20719	270 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ERVFRD-1	P60508	538 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DAZAP2	Q15038	168 aa	Predicted RBP	11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C4orf17	Q53FE4	359 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	KHDC3L	Q587J8	217 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	OR10D4P	Q8NGN7	298 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ADGRG7	Q96K78	797 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	DOCK7	Q96N67	2140 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	ZNF665	Q9H7R5	613 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TAAR3P	Q9P1P4	343 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PILRB	Q9UKJ0	227 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071		A0A0G2JRQ6	117 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PINLYP	A6NC86	204 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FAM166B	A8MTA8	275 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TRGC2	P03986	189 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	CDX1	P47902	265 aa	Predicted RBP	11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	FOXG1	P55316	489 aa	Predicted RBP	11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	C9orf152	Q5JTZ5	239 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PPP1R32	Q7Z5V6	425 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	MCEMP1	Q8IX19	187 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	RAB40C	Q96S21	281 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	RIMS4	Q9H426	269 aa	Predicted RBP	11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	PLK3	Q9H4B4	646 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TCFL5	Q9UL49	500 aa		11.48	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TRIOBP	Q9H2D6	2365 aa		11.47	□□□□□ -0.57
SUPT20H-222	ENST00000495071	TUSC2	O75896	110 aa		11.47	□□□□□ -0.57

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