RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ZNF555Q8NEP9 628 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 OR52N1Q8NH53 320 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 CCDC107Q8WV48 283 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 CYGBQ8WWM9 190 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 CREB3L1Q96BA8 519 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 CPNE2Q96FN4 548 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-208ENST00000494728 RDH12Q96NR8 316 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 MYCBPQ99417 103 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-208ENST00000494728 BARHL1Q9BZE3 327 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 TMEM138Q9NPI0 162 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 BABAM2Q9NXR7 383 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 ING4Q9UNL4 249 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF281Q9Y2X9 895 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-208ENST00000494728 RYR3Q15413 4870 aa9.21□□□□□ -0.94
VTI1A-208ENST00000494728 TRBV5-7A0A0A0MS05 114 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 TMEM30CPA0ZSE6 113 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 K7EIL1 84 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 EBAG9O00559 213 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 HSD17B6O14756 317 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 PF4P02776 101 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 FSTP19883 344 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 BDKRB2P30411 391 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 KCNJ3P48549 501 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 PPP3R1P63098 170 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 ADARB1P78563 741 aaKnown RBP9.2□□□□□ -0.94
VTI1A-208ENST00000494728 RIPK1Q13546 671 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 HES1Q14469 280 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF497Q6ZNH5 498 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 C5orf24Q7Z6I8 188 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 THNSL2Q86YJ6 484 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 Q8N6K4 173 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 GGHQ92820 318 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 MUL1Q969V5 352 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 OR14A2Q96R54 314 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 METTL9Q9H1A3 318 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 RCC2Q9P258 522 aaKnown RBP9.2□□□□□ -0.94
VTI1A-208ENST00000494728 DNAH7Q8WXX0 4024 aa9.2□□□□□ -0.94
VTI1A-208ENST00000494728 IGHV1-3A0A0C4DH29 117 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF736B4DX44 427 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-208ENST00000494728 MPIG6BO95866 241 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 FAM106CPP0CH98 169 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 TMEM11P17152 192 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 VHLP40337 213 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF816Q0VGE8 651 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-208ENST00000494728 INSL4Q14641 139 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 Q499Y3 187 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 ATAD3CQ5T2N8 411 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 TMPRSS11AQ6ZMR5 421 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 LCNL1Q6ZST4 164 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 OR8H3Q8N146 312 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF439Q8NDP4 499 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 TMEM104Q8NE00 496 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 OR10X1Q8NGY0 326 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 ARL11Q969Q4 196 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 TMEM80Q96HE8 168 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 GFOD1Q9NXC2 390 aa9.19□□□□□ -0.94
VTI1A-208ENST00000494728 EXOSC1Q9Y3B2 195 aaKnown RBP9.19□□□□□ -0.94
VTI1A-208ENST00000494728 HUWE1Q7Z6Z7 4374 aaKnown RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 WI2-2373I1.2A0A1W2PRP0 233 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 C12orf77C9JDV5 145 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 M0QZK8 103 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 SDCBPO00560 298 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 FGF16O43320 207 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 GPX5O75715 221 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 MT-ND4P03905 459 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 CSTBP04080 98 aaKnown RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 MYL12AP19105 171 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 HOXD3P31249 432 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 RAB7AP51149 207 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF134P52741 427 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 RPL23AP62750 156 aaKnown RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 ST3GAL4Q11206 333 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 EBI3Q14213 229 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 RCN1Q15293 331 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 MPV17LQ2QL34 196 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 YIF1BQ5BJH7 314 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 SIGIRRQ6IA17 410 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 OR2W3Q7Z3T1 314 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 C10orf67Q8IYJ2 551 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 IZUMO1Q8IYV9 350 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 OR10A7Q8NGE5 316 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 OR10V1Q8NGI7 309 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 NEK7Q8TDX7 302 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 DUX3Q96PT4 197 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 DERL3Q96Q80 235 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 BANF2Q9H503 90 aa9.18□□□□□ -0.94
VTI1A-208ENST00000494728 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-208ENST00000494728 MRPS28Q9Y2Q9 187 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms