RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MAGEB3O15480 346 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 CIB2O75838 187 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 OR7C1O76099 320 aaPredicted RBP9.93□□□□□ -0.82
SKA1-205ENST00000494518 RPSAP08865 295 aaKnown RBP9.93□□□□□ -0.82
SKA1-205ENST00000494518 GPR12P47775 334 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 SLC25A30Q5SVS4 291 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 NEK7Q8TDX7 302 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 MRPL48Q96GC5 212 aaKnown RBP9.93□□□□□ -0.82
SKA1-205ENST00000494518 ASCL2Q99929 193 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 DCLRE1BQ9H816 532 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 FAM118AQ9NWS6 357 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 ERVK13-1Q9NX77 482 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 ING4Q9UNL4 249 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 ST3GAL6Q9Y274 331 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 GMPPBQ9Y5P6 360 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 A0A1W2PP11 408 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 AP4M1O00189 453 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 SDCBPO00560 298 aaPredicted RBP9.92□□□□□ -0.82
SKA1-205ENST00000494518 GEMIN2O14893 280 aaKnown RBP9.92□□□□□ -0.82
SKA1-205ENST00000494518 SLC31A2O15432 143 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
SKA1-205ENST00000494518 GABRB1P18505 474 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 SERPINA2P20848 420 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 ZNF816Q0VGE8 651 aaPredicted RBP9.92□□□□□ -0.82
SKA1-205ENST00000494518 GPR50Q13585 617 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 ATAD3CQ5T2N8 411 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 XAF1Q6GPH4 301 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 TEX38Q6PEX7 206 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 SYS1Q8N2H4 156 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 COMMD1Q8N668 190 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 Q8N9W7 124 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 ARL11Q969Q4 196 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 JAM3Q9BX67 310 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 NCOR1P1Q9H4R4 102 aa9.92□□□□□ -0.82
SKA1-205ENST00000494518 TMEM30CPA0ZSE6 113 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 SNTNA6NMZ2 147 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 SEC14L6B5MCN3 397 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 C15orf65H3BRN8 121 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 ECI1P42126 302 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 KCNJ3P48549 501 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 RASSF2P50749 326 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 ALDH3A2P51648 485 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 GBX2P52951 348 aaPredicted RBP9.91□□□□□ -0.82
SKA1-205ENST00000494518 PNLIPRP3Q17RR3 467 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
SKA1-205ENST00000494518 DDI2Q5TDH0 399 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 TGIF2LXQ8IUE1 241 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 IZUMO1Q8IYV9 350 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 CBR4Q8N4T8 237 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 Q8N6K4 173 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 OR10V1Q8NGI7 309 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 OR52I1Q8NGK6 324 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 OR2T10Q8NGZ9 312 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 CPNE2Q96FN4 548 aaPredicted RBP9.91□□□□□ -0.82
SKA1-205ENST00000494518 HSPB9Q9BQS6 159 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 ABCG5Q9H222 651 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 GFOD1Q9NXC2 390 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 U3KQK5 164 aa9.91□□□□□ -0.82
SKA1-205ENST00000494518 H3BNX3 289 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 FADS2O95864 444 aaKnown RBP9.9□□□□□ -0.82
SKA1-205ENST00000494518 SLC6A1P30531 599 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 RBM11P57052 281 aaKnown RBP9.9□□□□□ -0.82
SKA1-205ENST00000494518 DCTN2Q13561 401 aaKnown RBP9.9□□□□□ -0.82
SKA1-205ENST00000494518 EBI3Q14213 229 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 NKAPLQ5M9Q1 402 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 ZNF529Q6P280 563 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 SLC16A12Q6ZSM3 486 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 OR10A7Q8NGE5 316 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 OR5M8Q8NGP6 311 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 OR13C5Q8NGS8 318 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 OR8U1Q8NH10 309 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 OR52N1Q8NH53 320 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 RTN4IP1Q8WWV3 396 aaPredicted RBP9.9□□□□□ -0.82
SKA1-205ENST00000494518 TMEM106AQ96A25 262 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 CYYR1Q96J86 154 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 S1PR3Q99500 378 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 METTL9Q9H1A3 318 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 PLSCR3Q9NRY6 295 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
SKA1-205ENST00000494518 SACSQ9NZJ4 4579 aa9.9□□□□□ -0.82
SKA1-205ENST00000494518 RYR2Q92736 4967 aa9.9□□□□□ -0.83
SKA1-205ENST00000494518 MPZL2O60487 215 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 RAMP3O60896 148 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
SKA1-205ENST00000494518 SLC2A2P11168 524 aaPredicted RBP9.89□□□□□ -0.83
SKA1-205ENST00000494518 MYF6P23409 242 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 IL3RAP26951 378 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 ZNF93P35789 620 aaPredicted RBP9.89□□□□□ -0.83
SKA1-205ENST00000494518 F2RL1P55085 397 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 PAX5Q02548 391 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 FOXE3Q13461 319 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 SLC22A6Q4U2R8 563 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 ASCL4Q6XD76 172 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 PRR18Q8N4B5 295 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 TMEM104Q8NE00 496 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms