RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 COPZ2Q9P299 210 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 GHRLQ9UBU3 117 aa10.79□□□□□ -0.68
ERCC3-209ENST00000494464 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 TMEM14DPA8MWL7 114 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 NPFFO15130 113 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 ORC5O43913 435 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 TK1P04183 234 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
ERCC3-209ENST00000494464 HCKP08631 526 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 PRKACBP22694 351 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 UBE2E1P51965 193 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 ATP1B3P54709 279 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
ERCC3-209ENST00000494464 KLRD1Q13241 179 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 OLFML2AQ68BL7 652 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 FIP1L1Q6UN15 594 aaKnown RBP10.78□□□□□ -0.68
ERCC3-209ENST00000494464 LHFPL2Q6ZUX7 228 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 DYRK2Q92630 601 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 DPAGT1Q9H3H5 408 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 SEBOXQ9HB31 216 aaPredicted RBP10.78□□□□□ -0.68
ERCC3-209ENST00000494464 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 TAS2R8Q9NYW2 309 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 OR14J1Q9UGF5 321 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
ERCC3-209ENST00000494464 FAM96BQ9Y3D0 163 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
ERCC3-209ENST00000494464 A0A1B0GUS0 222 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 ANKRD20A5PA0PJZ0 165 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 MEIOCA2RUB1 952 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 METTL21EPA6NDL7 271 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 F8VVB4 439 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 F8VWA3 439 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 K7N7A8 449 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF737O75373 536 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 KDM4BO94953 1096 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 NDUFA7O95182 113 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 IGHV4-59P01825 116 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 CHRM2P08172 466 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 VSIG8P0DPA2 414 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 SAA4P35542 130 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 IER3P46695 156 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 DLX1P56177 255 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 UNC119Q13432 240 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 RNASE12Q5GAN4 147 aaKnown RBP10.77□□□□□ -0.68
ERCC3-209ENST00000494464 AWAT2Q6E213 333 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 SHISA2Q6UWI4 295 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 SLC25A26Q70HW3 274 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 BATF2Q8N1L9 274 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 EMG1Q92979 244 aaKnown RBP10.77□□□□□ -0.68
ERCC3-209ENST00000494464 FAM46BQ96A09 425 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 SLAMF9Q96A28 289 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 NKX3-1Q99801 234 aaPredicted RBP10.77□□□□□ -0.68
ERCC3-209ENST00000494464 MTFP1Q9UDX5 166 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 NUBP2Q9Y5Y2 271 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.68
ERCC3-209ENST00000494464 TRAV18A0A075B6X5 111 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 CYB5AP00167 134 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 CSF1P09603 554 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 MDKP21741 143 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-209ENST00000494464 MTCP1P56278 107 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 COL10A1Q03692 680 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 PRB3Q04118 309 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-209ENST00000494464 KISS1Q15726 138 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 RSBN1Q5VWQ0 802 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-209ENST00000494464 HCP5Q6MZN7 132 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 MKXQ8IYA7 352 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 ASCC1Q8N9N2 400 aaKnown RBP10.77□□□□□ -0.69
ERCC3-209ENST00000494464 OR4F5Q8NH21 305 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 TNFRSF19Q9NS68 423 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 C1RLQ9NZP8 487 aa10.77□□□□□ -0.69
ERCC3-209ENST00000494464 ZNF107Q9UII5 783 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-209ENST00000494464 A0A0B4J293 547 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 hCG_1809904A0A1W2PP81 198 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 A0A1W2PR64 198 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 A0A1W2PRV1 198 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 GPR137BO60478 399 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 RBBP9O75884 186 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 RBP4P02753 201 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 CRYBA1P05813 215 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 LPLP06858 475 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 HLA-DMAP28067 261 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 PRSS3P35030 304 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 OR3A4PP47883 348 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 RAG2P55895 527 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 ACTBP60709 375 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 ZNF273Q14593 569 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 MIDNQ504T8 468 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 SPIN3Q5JUX0 258 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 TMEM200BQ69YZ2 307 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 CRIP3Q6Q6R5 217 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 GLIPR1L1Q6UWM5 242 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 AKAP14Q86UN6 197 aa10.76□□□□□ -0.69
ERCC3-209ENST00000494464 C11orf42Q8N5U0 333 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms