RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-208ENST00000494334 IL1AP01583 271 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 ARG1P05089 322 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 TFAP2AP05549 437 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 MELTFP08582 738 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 SSTR5P35346 364 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 VEGFCP49767 419 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 ZNF626Q68DY1 528 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 OR52W1Q6IF63 320 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 LHFPL4Q7Z7J7 247 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 ABHD12Q8N2K0 398 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 OR4K15Q8NH41 348 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 MDFIQ99750 246 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 PLEKHJ1Q9NW61 149 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 IDI2-AS1Q9NZ38 188 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 TRAPPC2LQ9UL33 140 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 A0A087X0M5 115 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 A0A1B0GX30 115 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 FAM172BPA6NC97 362 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 C15orf65H3BRN8 121 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 TRIM77I1YAP6 450 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 FBP1P09467 338 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 RAB6AP20340 208 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 ALDH3B2P48448 385 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 LGALS4P56470 323 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 UBA52P62987 128 aaKnown RBP11□□□□□ -0.65
COL1A1-208ENST00000494334 DYNC1I2Q13409 638 aaKnown RBP11□□□□□ -0.65
COL1A1-208ENST00000494334 SLC9A3R2Q15599 337 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 UTF1Q5T230 341 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 Q6ZTK2 550 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 LDLRAD3Q86YD5 345 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 OR56B1Q8NGI3 324 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 MRPL30Q8TCC3 161 aaKnown RBP11□□□□□ -0.65
COL1A1-208ENST00000494334 ARL11Q969Q4 196 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 PTX4Q96A99 478 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 CLEC7AQ9BXN2 247 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 HSF4Q9ULV5 492 aa11□□□□□ -0.65
COL1A1-208ENST00000494334 CLDN34H7C241 214 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 ORC5O43913 435 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 PAHP00439 452 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 SNRPBP14678 240 aaKnown RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 RCC1P18754 421 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 NFYBP25208 207 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 PAX6P26367 422 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 CD34P28906 385 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 RPS19P39019 145 aaKnown RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 IER3P46695 156 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 LTC4SQ16873 150 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 MOGAT2Q3SYC2 334 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 PLAC9Q5JTB6 97 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 LDLRAD2Q5SZI1 272 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 BEND2Q8NDZ0 799 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 OR10A7Q8NGE5 316 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 UBALD1Q8TB05 177 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 ZFAND2BQ8WV99 257 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 ARHGAP5-AS1Q96IT6 56 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 PECRQ9BY49 303 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 NAA50Q9GZZ1 169 aaKnown RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 ZNF286AQ9HBT8 521 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 MBNL3Q9NUK0 354 aaKnown RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 ZNRD1Q9P1U0 126 aa10.99□□□□□ -0.65
COL1A1-208ENST00000494334 TBL2Q9Y4P3 447 aaKnown RBP10.99□□□□□ -0.65
COL1A1-208ENST00000494334 RNF212BA8MTL3 300 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 C12orf77C9JDV5 145 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 RAB27BO00194 218 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 NAPSAO96009 420 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 IGLV1-47P01700 117 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 IGHV4-59P01825 116 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 VBP1P61758 197 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 NCS1P62166 190 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 FAM189A2Q15884 450 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 C6orf183Q5T699 404 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 IDNKQ5T6J7 187 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 SLC16A12Q6ZSM3 486 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 ANKRD13BQ86YJ7 626 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 DYNAPQ8N1N2 210 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 OR4P4Q8NGL7 312 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 OR10R2Q8NGX6 335 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 FAM216AQ8WUB2 273 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 MALSU1Q96EH3 234 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 AK3Q9UIJ7 227 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 KCNK7Q9Y2U2 307 aa10.98□□□□□ -0.65
COL1A1-208ENST00000494334 METTL21EPA6NDL7 271 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 F2RL2O00254 374 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 GABARAPO95166 117 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 IGHV3-7P01780 117 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 RNASE1P07998 156 aaKnown RBP10.97□□□□□ -0.65
COL1A1-208ENST00000494334 LOXL3P58215 753 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 TRAT1Q6PIZ9 186 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 Q6ZPA2 131 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms