RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 DYRK2Q92630 601 aa10.18□□□□□ -0.78
TRA2A-209ENST00000494255 CHMP1AQ9HD42 196 aaPredicted RBP10.18□□□□□ -0.78
TRA2A-209ENST00000494255 IDI2-AS1Q9NZ38 188 aa10.18□□□□□ -0.78
TRA2A-209ENST00000494255 SOX21Q9Y651 276 aaPredicted RBP10.18□□□□□ -0.78
TRA2A-209ENST00000494255 A0A0U1RQK1 487 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ORC5O43913 435 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 GABARAPO95166 117 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ARG1P05089 322 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 FBP1P09467 338 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 NFYBP25208 207 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 SSTR5P35346 364 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 RPS19P39019 145 aaKnown RBP10.17□□□□□ -0.78
TRA2A-209ENST00000494255 HILS1P60008 231 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 SLC16A12Q6ZSM3 486 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 GAPTQ8N292 157 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 OR11H6Q8NGC7 330 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 OR10A7Q8NGE5 316 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 OR10R2Q8NGX6 335 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 RFESDQ8TAC1 157 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ARL11Q969Q4 196 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 RAB3CQ96E17 227 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
TRA2A-209ENST00000494255 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 PECRQ9BY49 303 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ATG5Q9H1Y0 275 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 KCNIP1Q9NZI2 227 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ETV7Q9Y603 341 aa10.17□□□□□ -0.78
TRA2A-209ENST00000494255 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
TRA2A-209ENST00000494255 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 SPINT2O43291 252 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 SCGNO76038 276 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 MRPS15P82914 257 aaKnown RBP10.16□□□□□ -0.78
TRA2A-209ENST00000494255 BAMBIQ13145 260 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 TUSC1Q2TAM9 212 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 RTN4RL2Q86UN3 420 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 ABHD12Q8N2K0 398 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 PHF21AQ96BD5 680 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 ARHGAP5-AS1Q96IT6 56 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 KIRREL1Q96J84 757 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 NAA50Q9GZZ1 169 aaKnown RBP10.16□□□□□ -0.78
TRA2A-209ENST00000494255 RIMS4Q9H426 269 aaPredicted RBP10.16□□□□□ -0.78
TRA2A-209ENST00000494255 LINC00574Q9H8X3 128 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
TRA2A-209ENST00000494255 FAM172BPA6NC97 362 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
TRA2A-209ENST00000494255 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 TOR1AO14656 332 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 NOL3O60936 208 aaKnown RBP10.15□□□□□ -0.78
TRA2A-209ENST00000494255 CD34P28906 385 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 GDNFP39905 211 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 TMEM50BP56557 158 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 ARL6IP1Q15041 203 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 LTC4SQ16873 150 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 ZNF626Q68DY1 528 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 MOB1BQ7L9L4 216 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 SETD6Q8TBK2 473 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 ZNF596Q8TC21 504 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 MRPL30Q8TCC3 161 aaKnown RBP10.15□□□□□ -0.78
TRA2A-209ENST00000494255 CMSS1Q9BQ75 279 aaKnown RBP10.15□□□□□ -0.78
TRA2A-209ENST00000494255 PRDM13Q9H4Q3 707 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 AK3Q9UIJ7 227 aa10.15□□□□□ -0.78
TRA2A-209ENST00000494255 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
TRA2A-209ENST00000494255 ODF3BA8MYP8 253 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 C12orf77C9JDV5 145 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 TRIM77I1YAP6 450 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 RAB27BO00194 218 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 VENTXO95231 258 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 CD3GP09693 182 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 RCC1P18754 421 aaPredicted RBP10.15□□□□□ -0.79
TRA2A-209ENST00000494255 PRRX1P54821 245 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 CTF1Q16619 201 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 MOGAT2Q3SYC2 334 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 PLAC9Q5JTB6 97 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 BAIAP2L2Q6UXY1 529 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 Q6YL49 198 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 ZNF554Q86TJ5 538 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 CLVS1Q8IUQ0 354 aaPredicted RBP10.15□□□□□ -0.79
TRA2A-209ENST00000494255 PRR18Q8N4B5 295 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 NDNFQ8TB73 568 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 SLC25A46Q96AG3 418 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 ZMAT3Q9HA38 289 aaKnown RBP10.15□□□□□ -0.79
TRA2A-209ENST00000494255 C12orf4Q9NQ89 552 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.79
TRA2A-209ENST00000494255 SPATA2Q9UM82 520 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 NF1P21359 2839 aa10.15□□□□□ -0.79
TRA2A-209ENST00000494255 A0A075B6Q4 140 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 C15orf65H3BRN8 121 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 SDCBPO00560 298 aaPredicted RBP10.14□□□□□ -0.79
TRA2A-209ENST00000494255 NAPSAO96009 420 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 HBZP02008 142 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 HIST1H1DP16402 221 aaKnown RBP10.14□□□□□ -0.79
TRA2A-209ENST00000494255 MINOS1Q5TGZ0 78 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 OR52M1Q8NGK5 317 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 OR5H6Q8NGV6 325 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 UBALD1Q8TB05 177 aa10.14□□□□□ -0.79
TRA2A-209ENST00000494255 RAB2BQ8WUD1 216 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms