RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 KIR2DS4P43632 304 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 GABARAPL2P60520 117 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 RBM39Q14498 530 aaKnown RBP18.22■□□□□ 0.51
SNIP1-203ENST00000493916 UTF1Q5T230 341 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 BRICD5Q6PL45 260 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 CCBE1Q6UXH8 406 aaPredicted RBP18.22■□□□□ 0.51
SNIP1-203ENST00000493916 SLC16A12Q6ZSM3 486 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 ZNF367Q7RTV3 350 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 OR9G1Q8NH87 305 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 NEK7Q8TDX7 302 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 BUB1B-PAK6H3BSN5 160 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 H3BUI4 141 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 GLAP06280 429 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 JUNBP17275 347 aaPredicted RBP18.21■□□□□ 0.51
SNIP1-203ENST00000493916 KRTAP10-3P60369 221 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 SRSF4Q08170 494 aaKnown RBP18.21■□□□□ 0.51
SNIP1-203ENST00000493916 RAB12Q6IQ22 244 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 DTX3Q8N9I9 347 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 MMP28Q9H239 520 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 Q9H521 79 aa18.21■□□□□ 0.51
SNIP1-203ENST00000493916 KIAA2026Q5HYC2 2103 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 TRAV39A0A0B4J263 110 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 OOSP1A8MZH6 123 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 LY6LH3BQJ8 138 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 SLC22A1O15245 554 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 MRPS14O60783 128 aaKnown RBP18.2■□□□□ 0.5
SNIP1-203ENST00000493916 ARL6IP5O75915 188 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 MT-ND4P03905 459 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 FUT3P21217 361 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 ARHGDIBP52566 201 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 TPTE2P1Q5T6R2 138 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 C11orf88Q6PI97 169 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 GAPTQ8N292 157 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 FAM46BQ96A09 425 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 ACOT13Q9NPJ3 140 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 AMMECR1Q9Y4X0 333 aaPredicted RBP18.2■□□□□ 0.5
SNIP1-203ENST00000493916 PEX16Q9Y5Y5 336 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 TRRAPQ9Y4A5 3859 aa18.2■□□□□ 0.5
SNIP1-203ENST00000493916 C15orf65H3BRN8 121 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 J3QR06 171 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 AIPO00170 330 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 DENRO43583 198 aaKnown RBP18.19■□□□□ 0.5
SNIP1-203ENST00000493916 ORC5O43913 435 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 CA11O75493 328 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 VSIG8P0DPA2 414 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 EFNB2P52799 333 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 SIGIRRQ6IA17 410 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 TMEM219Q86XT9 240 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 OR6M1Q8NGM8 313 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 RFESDQ8TAC1 157 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 ETAA1Q9NY74 926 aa18.19■□□□□ 0.5
SNIP1-203ENST00000493916 PDCD6O75340 191 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 HTR2CP28335 458 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 BRS3P32247 399 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 FABP5Q01469 135 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 CCDC144NLQ6NUI1 221 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 Q8N2B8 174 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 OR52M1Q8NGK5 317 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 OR2T6Q8NHC8 308 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 PSG11Q9UQ72 335 aa18.18■□□□□ 0.5
SNIP1-203ENST00000493916 BPNT1O95861 308 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 MPIG6BO95866 241 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 RPS27AP62979 156 aaKnown RBP18.17■□□□□ 0.5
SNIP1-203ENST00000493916 LTC4SQ16873 150 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 KCNG3Q8TAE7 436 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 CCDC107Q8WV48 283 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 LEAP2Q969E1 77 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 ARL11Q969Q4 196 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 GFI1Q99684 422 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 TMEM59Q9BXS4 323 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 ZNF702PQ9H963 129 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 SIGLEC9Q9Y336 463 aa18.17■□□□□ 0.5
SNIP1-203ENST00000493916 QRFPP83859 136 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 EMX1Q04741 257 aaPredicted RBP18.16■□□□□ 0.5
SNIP1-203ENST00000493916 UNC119Q13432 240 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 SSX1Q16384 188 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 C6orf183Q5T699 404 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 SYT6Q5T7P8 510 aaPredicted RBP18.16■□□□□ 0.5
SNIP1-203ENST00000493916 TRAT1Q6PIZ9 186 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 C16orf82Q7Z2V1 217 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 TM2D1Q9BX74 207 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 RAB9BQ9NP90 201 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 NDUFB11Q9NX14 153 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 TRAPPC2LQ9UL33 140 aa18.16■□□□□ 0.5
SNIP1-203ENST00000493916 TMEM14DPA8MWL7 114 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 SLC17A2O00624 439 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 IGHV3-7P01780 117 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 CALRP27797 417 aaKnown RBP18.15■□□□□ 0.5
SNIP1-203ENST00000493916 MNDAP41218 407 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 LOXL3P58215 753 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 MADCAM1Q13477 382 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 TMEM30BQ3MIR4 351 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 OR10K2Q6IF99 312 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 SVOPQ8N4V2 548 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 C8orf31Q8N9H6 132 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 TOMM40LQ969M1 308 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 RPEQ96AT9 228 aa18.15■□□□□ 0.5
SNIP1-203ENST00000493916 YTHDF1Q9BYJ9 559 aaKnown RBP18.15■□□□□ 0.5
SNIP1-203ENST00000493916 MGAM2Q2M2H8 2515 aa18.14■□□□□ 0.49
SNIP1-203ENST00000493916 C12orf77C9JDV5 145 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms