RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PIP4P1Q86T03 277 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 BATF2Q8N1L9 274 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.09
NPHP3-209ENST00000493732 SARAFQ96BY9 339 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 RAB40CQ96S21 281 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 C19orf12Q9NSK7 152 aa8.21□□□□□ -1.09
NPHP3-209ENST00000493732 MYO15AQ9UKN7 3530 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 SPEGQ15772 3267 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 IGKV1D-13A0A0B4J2D9 117 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 IGKV1-6A0A0C4DH72 117 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 AQP7O14520 342 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 HSPB6O14558 160 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 OR8U9P0C7N5 309 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 PGA5P0DJD9 388 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 IGKV1-13P0DP09 117 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 CBR1P16152 277 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 PAX6P26367 422 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 RAB2AP61019 212 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 RPL23AP62750 156 aaKnown RBP8.21□□□□□ -1.1
NPHP3-209ENST00000493732 SRSF3P84103 164 aaKnown RBP8.21□□□□□ -1.1
NPHP3-209ENST00000493732 NHLH2Q02577 135 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 MZT1Q08AG7 82 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 ZNF616Q08AN1 781 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 DPPA3Q6W0C5 159 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 ZNF497Q6ZNH5 498 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 STX12Q86Y82 276 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 SCCPDHQ8NBX0 429 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 ZBTB34Q8NCN2 500 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 ADAT1Q9BUB4 502 aaKnown RBP8.21□□□□□ -1.1
NPHP3-209ENST00000493732 UNKLQ9H9P5 680 aaKnown RBP8.21□□□□□ -1.1
NPHP3-209ENST00000493732 WFDC1Q9HC57 220 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 OBP2BQ9NPH6 170 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 LIN7CQ9NUP9 197 aaKnown RBP8.21□□□□□ -1.1
NPHP3-209ENST00000493732 KCNIP1Q9NZI2 227 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 TAAR3PQ9P1P4 343 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 IL36RNQ9UBH0 155 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 TRAPPC2LQ9UL33 140 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 KNTC1P50748 2209 aa8.21□□□□□ -1.1
NPHP3-209ENST00000493732 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 SHANK1Q9Y566 2161 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 ATP6V1G2-DDX39BF2Z307 99 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.2□□□□□ -1.1
NPHP3-209ENST00000493732 NXPH2O95156 264 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 IGHV1-2P23083 117 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 POLR2GP62487 172 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPHP3-209ENST00000493732 GUK1Q16774 197 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 MIDNQ504T8 468 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 C17orf78Q8N4C9 275 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 WNT2BQ93097 391 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 OR2J1Q9GZK6 312 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 TMEM231Q9H6L2 316 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 SMCO4Q9NRQ5 59 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 MBNL3Q9NUK0 354 aaKnown RBP8.2□□□□□ -1.1
NPHP3-209ENST00000493732 MLXQ9UH92 298 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 ERRFI1Q9UJM3 462 aaPredicted RBP8.2□□□□□ -1.1
NPHP3-209ENST00000493732 ZDHHC8Q9ULC8 765 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 FAM96BQ9Y3D0 163 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 WIPI2Q9Y4P8 454 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 ARHGAP21Q5T5U3 1957 aa8.2□□□□□ -1.1
NPHP3-209ENST00000493732 FAM24AA6NFZ4 105 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 SSSCA1O60232 199 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 OR2H2O95918 312 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 CEACAM1P13688 526 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 IDH3GP51553 393 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 GUSBP1Q15486 140 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 MSMO1Q15800 293 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 IGF2-ASQ6U949 168 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 HSD17B11Q8NBQ5 300 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 OR1J1Q8NGS3 322 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 OR8U1Q8NH10 309 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 RNASE11Q8TAA1 199 aaKnown RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 ZNF488Q96MN9 340 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 TRIB1Q96RU8 372 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 BCL2L14Q9BZR8 327 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 EIF5A2Q9GZV4 153 aaKnown RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 HIPK2Q9H2X6 1198 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 RBM7Q9Y580 266 aaKnown RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 IGSF23A1L1A6 192 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 AHRRA9YTQ3 701 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 SLC33A1O00400 549 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 AGPAT2O15120 278 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 SIGLEC5O15389 551 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 LILRA1O75019 489 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 RHBDL1O75783 438 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 COX5AP20674 150 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 LMO1P25800 156 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 EIF2S3P41091 472 aaKnown RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-209ENST00000493732 SPATA46Q5T0L3 261 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 C20orf204Q6ZNR8 217 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 SLC25A40Q8TBP6 338 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 OR51B6Q9H340 312 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 PLA2G2EQ9NZK7 142 aa8.19□□□□□ -1.1
NPHP3-209ENST00000493732 RNF150Q9ULK6 438 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms