RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CCRL2O00421 344 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF780AO75290 641 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-208ENST00000493601 GAPDHP04406 335 aaKnown RBP13.14□□□□□ -0.31
PTPRU-208ENST00000493601 SERPINA2P20848 420 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 DCKP27707 260 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 BDKRB2P30411 391 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 ETV1P50549 477 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 KRTAP10-11P60412 298 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 IZUMO1Q8IYV9 350 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 PQLC1Q8N2U9 271 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 OR52M1Q8NGK5 317 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 SMIM19Q96E16 107 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
PTPRU-208ENST00000493601 S100A14Q9HCY8 104 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 ZFP57Q9NU63 452 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF581Q9P0T4 197 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 A0A1W2PPE3 182 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-208ENST00000493601 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
PTPRU-208ENST00000493601 IGHG2P01859 326 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 MYL12AP19105 171 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 HOXD3P31249 432 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-208ENST00000493601 THBS3P49746 956 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 RIPK1Q13546 671 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 EBI3Q14213 229 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 SMN1Q16637 294 aaKnown RBP13.13□□□□□ -0.31
PTPRU-208ENST00000493601 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 TGIF2LXQ8IUE1 241 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 STX19Q8N4C7 294 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 C8orf31Q8N9H6 132 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 ARL11Q969Q4 196 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 RDH12Q96NR8 316 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
PTPRU-208ENST00000493601 WI2-2373I1.2A0A1W2PRP0 233 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 C15orf65H3BRN8 121 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 ORC5O43913 435 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 GTF2F2P13984 249 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 IL3RAP26951 378 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 REG1BP48304 166 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 VAX1Q5SQQ9 334 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 ATAD3CQ5T2N8 411 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 STPG2Q8N412 459 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 LINC00311Q8N616 119 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF184Q99676 751 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-208ENST00000493601 GON7Q9BXV9 100 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 SPACA1Q9HBV2 294 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-208ENST00000493601 LINC00527Q9UJ94 153 aa13.12□□□□□ -0.31
PTPRU-208ENST00000493601 DIMT1Q9UNQ2 313 aaKnown RBP13.12□□□□□ -0.31
PTPRU-208ENST00000493601 EXOSC1Q9Y3B2 195 aaKnown RBP13.12□□□□□ -0.31
PTPRU-208ENST00000493601 IGHV3-72A0A0B4J1Y9 119 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 NCBP2LA6PVI3 153 aaKnown RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 AIPO00170 330 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 AP4M1O00189 453 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 OGG1O15527 345 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 MYCNOSP40205 109 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 MED21Q13503 144 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 GPR176Q14439 515 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 Q3ZCU0 254 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 SLC22A6Q4U2R8 563 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 LIN7CQ9NUP9 197 aaKnown RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 GFOD1Q9NXC2 390 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 BABAM2Q9NXR7 383 aa13.11□□□□□ -0.31
PTPRU-208ENST00000493601 SIRT4Q9Y6E7 314 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-208ENST00000493601 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 TXNL1O43396 289 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
PTPRU-208ENST00000493601 FSTP19883 344 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 GPR12P47775 334 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 YIF1BQ5BJH7 314 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 TEX38Q6PEX7 206 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 Q8N6K4 173 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 GHSRQ92847 366 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 ABCG5Q9H222 651 aa13.1□□□□□ -0.31
PTPRU-208ENST00000493601 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
PTPRU-208ENST00000493601 ZMAT5Q9UDW3 170 aaKnown RBP13.1□□□□□ -0.31
PTPRU-208ENST00000493601 A0A1W2PP11 408 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 SPINT2O43291 252 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 MOSP00540 346 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 MT-ND4P03905 459 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 CD1BP29016 333 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms