RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 RNF224P0DH78 156 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
TRIM11-204ENST00000493030 ZFP36L2P47974 494 aaKnown RBP11.9□□□□□ -0.5
TRIM11-204ENST00000493030 COL10A1Q03692 680 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 TPRX1Q8N7U7 411 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 FGF11Q92914 225 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 NKX2-6A6NCS4 301 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 IL11P20809 199 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 ACAA2P42765 397 aaKnown RBP11.9□□□□□ -0.5
TRIM11-204ENST00000493030 C1orf185Q5T7R7 199 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 GPA33Q99795 319 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PPIAL4EA0A075B759 164 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PPIAL4DF5H284 164 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 RGS13O14921 159 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 NKX2-8O15522 239 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 SYNGR1O43759 233 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 CIDEAO60543 219 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 CRHP06850 196 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 FTH1P19P0C7X4 201 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PPIAL4FP0DN26 164 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 NSUN5P2Q63ZY6 315 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 ADAD2Q8NCV1 583 aaKnown RBP11.9□□□□□ -0.5
TRIM11-204ENST00000493030 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 ZNF426Q9BUY5 554 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
TRIM11-204ENST00000493030 HMSDA8MTL9 139 aa11.9□□□□□ -0.51
TRIM11-204ENST00000493030 PRSS1P07477 247 aa11.9□□□□□ -0.51
TRIM11-204ENST00000493030 PSG2P11465 335 aa11.9□□□□□ -0.51
TRIM11-204ENST00000493030 PRF1P14222 555 aa11.9□□□□□ -0.51
TRIM11-204ENST00000493030 MCM3APO60318 1980 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 B4E171 279 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 TSPAN7P41732 249 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
TRIM11-204ENST00000493030 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 DYNLRB2Q8TF09 96 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 IL22RA2Q969J5 263 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 NPAS1Q99742 590 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 ANKRD55Q3KP44 614 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 V9GYH0 126 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 CLDN14O95500 239 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 EFNB2P52799 333 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 ATXN7O15265 892 aaPredicted RBP11.89□□□□□ -0.51
TRIM11-204ENST00000493030 FAM157CP0CG43 387 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 CXCL3P19876 107 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 COL8A1P27658 744 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 MMP16P51512 607 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 FDX2Q6P4F2 183 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
TRIM11-204ENST00000493030 DNPH1O43598 174 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 UCNP55089 124 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 LPAR5Q9H1C0 372 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 PCDHGA9Q9Y5G4 932 aaKnown RBP11.88□□□□□ -0.51
TRIM11-204ENST00000493030 P01737 135 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 PGLYRP3Q96LB9 341 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 PRDX2P32119 198 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 SLC25A42Q86VD7 318 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 TMEM251Q8N6I4 163 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 RCC2Q9P258 522 aaKnown RBP11.88□□□□□ -0.51
TRIM11-204ENST00000493030 KLHDC2Q9Y2U9 406 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 COL4A1P02462 1669 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 CRXO43186 299 aaPredicted RBP11.88□□□□□ -0.51
TRIM11-204ENST00000493030 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
TRIM11-204ENST00000493030 SFTPCP11686 197 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 KCNMB1Q16558 191 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 TMEM183BQ1AE95 376 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 ARG1P05089 322 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 ADRA2AP08913 450 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 CCL13Q99616 98 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 PRO1933Q9H354 126 aa11.88□□□□□ -0.51
TRIM11-204ENST00000493030 IGHV1-45A0A0A0MS14 117 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 MFNGO00587 321 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 C1QCP02747 245 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 NPY1RP25929 384 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 WNT5AP41221 380 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 RPL29P47914 159 aaKnown RBP11.87□□□□□ -0.51
TRIM11-204ENST00000493030 EWSR1Q01844 656 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRIM11-204ENST00000493030 GGTLC2Q14390 218 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 OR10G8Q8NGN5 311 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 SCMH1Q96GD3 660 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
TRIM11-204ENST00000493030 J3QR06 171 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms