RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 SGCEO43556 437 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 CYTH3O43739 400 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 CRTAPO75718 401 aaPredicted RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 FADS2O95864 444 aaKnown RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 ZNF22P17026 224 aaPredicted RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 SYT1P21579 422 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 UGT2B10P36537 528 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 MAGEA6P43360 314 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 SULT1A2P50226 295 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 HADHBP55084 474 aaKnown RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 APOFQ13790 326 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 MMDQ15546 238 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 PYCR3Q53H96 274 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 C10orf91Q5T1B1 145 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 FAM162BQ5T6X4 162 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 SSX7Q7RTT5 188 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 NIT1Q86X76 327 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 SYCE1Q8N0S2 351 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 Q8NAQ8 132 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 ACBD4Q8NC06 268 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 ATP6V1C2Q8NEY4 427 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 OR8K1Q8NGG5 319 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 OR10D4PQ8NGN7 298 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 OR4K13Q8NH42 304 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 CCDC12Q8WUD4 166 aaPredicted RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 RAD51AP1Q96B01 352 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 TMIGD2Q96BF3 282 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 TREM1Q9NP99 234 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 TAS2R9Q9NYW1 312 aa1.8□□□□□ -2.12
CLK1-213ENST00000492793 RPUSD1Q9UJJ7 312 aaKnown RBP1.8□□□□□ -2.12
CLK1-213ENST00000492793 TRPM6Q9BX84 2022 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 B4DEV8 164 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 F5H5T6 163 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 G3V3Q6 166 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 POLR3GO15318 223 aaPredicted RBP1.79□□□□□ -2.12
CLK1-213ENST00000492793 YKT6O15498 198 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 OPN1SWP03999 348 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 GZMHP20718 246 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 PSMA1P25786 263 aaKnown RBP1.79□□□□□ -2.12
CLK1-213ENST00000492793 KCNJ3P48549 501 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 GABARAPL2P60520 117 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 DEFA6Q01524 100 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 OR4D1Q15615 310 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 USF2Q15853 346 aaPredicted RBP1.79□□□□□ -2.12
CLK1-213ENST00000492793 KRTCAP2Q8N6L1 136 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 OR5C1Q8NGR4 320 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 STACQ99469 402 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 COMMD9Q9P000 198 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 OTOFQ9HC10 1997 aa1.79□□□□□ -2.12
CLK1-213ENST00000492793 MYO5BQ9ULV0 1848 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 A0A1B0GX12 115 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 C8orf87E5RJ46 101 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 SLC25A20O43772 301 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 INPP1P49441 399 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 OR2B6P58173 313 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 OR10A3P58181 314 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 SYCP1Q15431 976 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 MAPK14Q16539 360 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 TTC33Q6PID6 262 aaPredicted RBP1.78□□□□□ -2.12
CLK1-213ENST00000492793 ZNF322Q6U7Q0 402 aaPredicted RBP1.78□□□□□ -2.12
CLK1-213ENST00000492793 COPS6Q7L5N1 327 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 SCXQ7RTU7 201 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 ZBTB8OSQ8IWT0 167 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 OR5D18Q8NGL1 313 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 PPWD1Q96BP3 646 aaKnown RBP1.78□□□□□ -2.12
CLK1-213ENST00000492793 EBNA1BP2Q99848 306 aaKnown RBP1.78□□□□□ -2.12
CLK1-213ENST00000492793 B9D2Q9BPU9 175 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 PRSS27Q9BQR3 290 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 OR51E2Q9H255 320 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 WASHC3Q9Y3C0 194 aa1.78□□□□□ -2.12
CLK1-213ENST00000492793 CHD2O14647 1828 aaKnown RBP1.77□□□□□ -2.13
CLK1-213ENST00000492793 ERICH2A1L162 156 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 GPR171O14626 319 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 LECT2O14960 151 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 SLC35E2BP0CK96 405 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 PVALBP20472 110 aaPredicted RBP1.77□□□□□ -2.13
CLK1-213ENST00000492793 PSMD7P51665 324 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 SKP2Q13309 424 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 PAFAH1B3Q15102 231 aaKnown RBP1.77□□□□□ -2.13
CLK1-213ENST00000492793 OR9I1Q8NGQ6 314 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 GTF2H4Q92759 462 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 MED10Q9BTT4 135 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 ALX4Q9H161 411 aaPredicted RBP1.77□□□□□ -2.13
CLK1-213ENST00000492793 FBXL3Q9UKT7 428 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 LINC00588Q9Y4M8 146 aa1.77□□□□□ -2.13
CLK1-213ENST00000492793 DNMT1P26358 1616 aaKnown RBP1.77□□□□□ -2.13
CLK1-213ENST00000492793 ERICH4A6NGS2 130 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 A8MWP6 167 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 FAM25EA8MYX2 175 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 TMEM250H0YL14 139 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 LIMS3P0CW19 117 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 LIMS4P0CW20 117 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 PPP1CCP36873 323 aaKnown RBP1.76□□□□□ -2.13
CLK1-213ENST00000492793 SPAM1P38567 509 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 PSG4Q00888 419 aa1.76□□□□□ -2.13
CLK1-213ENST00000492793 TMEM249Q2WGJ8 235 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms