RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 NAPSAO96009 420 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 CCL11P51671 97 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 BTNL8Q6UX41 500 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 OR5A2Q8NGI9 324 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 SUCNR1Q9BXA5 334 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 CACFD1Q9UGQ2 172 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 RCL1Q9Y2P8 373 aaKnown RBP10.97□□□□□ -0.65
PRAME-213ENST00000492657 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 C7orf77A4D0Y5 90 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 ANKRD30BLA7E2S9 258 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 MPPED1O15442 326 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 ASCL1P50553 236 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 ERVS71-1P61550 626 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 SLC35G3Q8N808 338 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 CD300LFQ8TDQ1 290 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 SYT3Q9BQG1 590 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 WFDC1Q9HC57 220 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 FAM86C1Q9NVL1 165 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 MMP24Q9Y5R2 645 aa10.97□□□□□ -0.65
PRAME-213ENST00000492657 SPTBN2O15020 2390 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 ZFHX2Q9C0A1 2572 aaPredicted RBP10.96□□□□□ -0.65
PRAME-213ENST00000492657 NKX2-6A6NCS4 301 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 UCP3P55916 312 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 DMRTC2Q8IXT2 367 aaPredicted RBP10.96□□□□□ -0.65
PRAME-213ENST00000492657 LGI3Q8N145 548 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 SUMF2Q8NBJ7 301 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 DEFB124Q8NES8 71 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 GGACTQ9BVM4 153 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 SPACA1Q9HBV2 294 aa10.96□□□□□ -0.65
PRAME-213ENST00000492657 C3orf85A0A1B0GTC6 90 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 HSD17B6O14756 317 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 CD5P06127 495 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 OR13C7P0DN81 318 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 WT1P19544 449 aaPredicted RBP10.96□□□□□ -0.66
PRAME-213ENST00000492657 ALKBH6Q3KRA9 238 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 SAXO1Q8IYX7 474 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 GAPTQ8N292 157 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 LRTM2Q8N967 370 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 SUMF1Q8NBK3 374 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.66
PRAME-213ENST00000492657 PARP11Q9NR21 331 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 URGCP-MRPS24S4R325 110 aa10.96□□□□□ -0.66
PRAME-213ENST00000492657 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.66
PRAME-213ENST00000492657 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 CXorf65A6NEN9 183 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 TSPAN15O95858 294 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 TK1P04183 234 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 S100A8P05109 93 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 HEXAP06865 529 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 PMELP40967 661 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 SOX8P57073 446 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FBXW12Q6X9E4 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 DPPA2Q7Z7J5 298 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 EIF5A2Q9GZV4 153 aaKnown RBP10.95□□□□□ -0.66
PRAME-213ENST00000492657 CCL28Q9NRJ3 127 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A10PA6NDY2 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A18PA6NE21 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A16PA6NEW6 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A20PA6NIJ5 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A8PA6NJQ4 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A7PA6NKC0 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A22PA8MWA6 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A12PA8MX19 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A5PA8MXJ8 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A23PA8MXZ1 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 SLC33A1O00400 549 aaPredicted RBP10.95□□□□□ -0.66
PRAME-213ENST00000492657 TNFSF12O43508 249 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 LYZL6O75951 148 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A15PP0C7V4 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A13PP0C7W8 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A14PP0C7W9 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM90A24PP0C7X0 464 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 SELEP16581 610 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 GPX4P36969 197 aaPredicted RBP10.95□□□□□ -0.66
PRAME-213ENST00000492657 TNFSF10P50591 281 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 IDH3GP51553 393 aaPredicted RBP10.95□□□□□ -0.66
PRAME-213ENST00000492657 DVL1P1P54792 670 aaPredicted RBP10.95□□□□□ -0.66
PRAME-213ENST00000492657 NHLH2Q02577 135 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 UBALD1Q8TB05 177 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 ZDHHC11Q9H8X9 412 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 CADP27708 2225 aa10.95□□□□□ -0.66
PRAME-213ENST00000492657 FAM157AC9JC47 383 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 GAPDHP04406 335 aaKnown RBP10.94□□□□□ -0.66
PRAME-213ENST00000492657 SELLP14151 372 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 S100PP25815 95 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 GNG3P63215 75 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 MIDNQ504T8 468 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 P4HA3Q7Z4N8 544 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 CCDC71LQ8N9Z2 235 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 FDCSPQ8NFU4 85 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 MRPL30Q8TCC3 161 aaKnown RBP10.94□□□□□ -0.66
PRAME-213ENST00000492657 PARD6AQ9NPB6 346 aa10.94□□□□□ -0.66
PRAME-213ENST00000492657 UBE2J1Q9Y385 318 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms