RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MMP28Q9H239 520 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 TMEM133Q9H2Q1 129 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 PLEKHA1Q9HB21 404 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 SMPD3Q9NY59 655 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-212ENST00000492407 MTCH1Q9NZJ7 389 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 NKX1-2Q9UD57 310 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-212ENST00000492407 MGAT4AQ9UM21 535 aa7.34□□□□□ -1.23
HDAC3-212ENST00000492407 UBE2J1Q9Y385 318 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-212ENST00000492407 IGHV2-26A0A0B4J1V2 119 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 TRBV2A0A0J9YWF9 115 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 FAM230AA0A1W2PPH8 454 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 A0A1W2PPQ1 181 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 GYG2O15488 501 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 SYT7O43581 403 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CYB5AP00167 134 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CTXN2P0C2S0 81 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CD36P16671 472 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 HTR1DP28221 377 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 VDAC2P45880 294 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CEBPDP49716 269 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-212ENST00000492407 DAPP51397 102 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 PPP5CP53041 499 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 ATP1B3P54709 279 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 BDH1Q02338 343 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 MED21Q13503 144 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 UBE2V2Q15819 145 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 NSUN5P1Q3KNT7 163 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 DMRTC1Q5HYR2 192 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 GPR107Q5VW38 600 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 ZNF676Q8N7Q3 588 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 TCEANCQ8N8B7 351 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 YIPF7Q8N8F6 280 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 ZNF596Q8TC21 504 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CORO2AQ92828 525 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 BORCS8Q96FH0 119 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 OR5M11Q96RB7 305 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 TMED9Q9BVK6 235 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CLEC7AQ9BXN2 247 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 CCDC59Q9P031 241 aaKnown RBP7.33□□□□□ -1.24
HDAC3-212ENST00000492407 DPM3Q9P2X0 92 aa7.33□□□□□ -1.24
HDAC3-212ENST00000492407 A0A0A6YYH2 397 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 A6NJ64 397 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 HSPA12AO43301 675 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 HAND1O96004 215 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 IFNA6P05013 189 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TFAP2AP05549 437 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 UBCP0CG48 685 aaKnown RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 PIPP12273 146 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 LMO1P25800 156 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 PAX6P26367 422 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 HTR1FP30939 366 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 CEACAM3P40198 252 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 RBP2P50120 134 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 BLCAPP62952 87 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 GRK1Q15835 563 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 LDLRAD2Q5SZI1 272 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM244Q5VVB8 128 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 KDM4DQ6B0I6 523 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 HEPN1Q6WQI6 88 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 SLC25A26Q70HW3 274 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TCF23Q7RTU1 214 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 SATL1Q86VE3 508 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM219Q86XT9 240 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 FAM58AQ8N1B3 248 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 OR5AU1Q8NGC0 362 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 OR2D3Q8NGH3 330 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 OR8J1Q8NGP2 316 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 SPSB1Q96BD6 273 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 RCC1LQ96I51 464 aaKnown RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 CADM1Q9BY67 442 aaKnown RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 CCDC90BQ9GZT6 254 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 GABARAPL1Q9H0R8 117 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 AURKAIP1Q9NWT8 199 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 POMPQ9Y244 141 aa7.32□□□□□ -1.24
HDAC3-212ENST00000492407 TSSC4Q9Y5U2 329 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-212ENST00000492407 IGKV1-27A0A075B6S5 117 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 TRGV10A0A0A0MS01 117 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 A0A1W2PQL4 384 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 LEUTXA8MZ59 168 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 F8VVB4 439 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 F8VWA3 439 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 G3V2T6 193 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 SH2D1BO14796 132 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 OR2F2O95006 317 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 IGLV1-47P01700 117 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 MT-ND2P03891 347 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ISG15P05161 165 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CSN2P05814 226 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CD33P20138 364 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CD34P28906 385 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms