RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZNF485Q8NCK3 441 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 OR10A7Q8NGE5 316 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 OR56B4Q8NH76 319 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 NEK7Q8TDX7 302 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 GGHQ92820 318 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 OR14A2Q96R54 314 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 PSG11Q9UQ72 335 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 MOB4Q9Y3A3 225 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 HSPE1-MOB4S4R3N1 261 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 TRBV5-7A0A0A0MS05 114 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 PNMA8CA0A1B0GUJ8 204 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 A0A1W2PPI3 338 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 A0A1W2PPK0 400 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 TCRBV4S1A1TA0A5B7 111 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A20PA6NIJ5 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A12PA8MX19 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 AIPO00170 330 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 HSD17B6O14756 317 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 MYL12BO14950 172 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 GPX5O75715 221 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 PRB2P02812 416 aaPredicted RBP6.58□□□□□ -1.36
LSM2-213ENST00000491421 AMY1AP04745 511 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 AMY2AP04746 511 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
LSM2-213ENST00000491421 SNRNP70P08621 437 aaKnown RBP6.58□□□□□ -1.36
LSM2-213ENST00000491421 GNAO1P09471 354 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A13PP0C7W8 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A24PP0C7X0 464 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 PF4V1P10720 104 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 GZMHP20718 246 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 CAPGP40121 348 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 RAB7AP51149 207 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 RPS11P62280 158 aaKnown RBP eCLIP6.58□□□□□ -1.36
LSM2-213ENST00000491421 CD83Q01151 205 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 GPR176Q14439 515 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 HES1Q14469 280 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 KHDC1LQ5JSQ8 128 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 AHSA2Q719I0 299 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 STX19Q8N4C7 294 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 DRAM1Q8N682 238 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 OR4X2Q8NGF9 303 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 ARL11Q969Q4 196 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 MUL1Q969V5 352 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 PGLYRP3Q96LB9 341 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 SPACA1Q9HBV2 294 aa6.58□□□□□ -1.36
LSM2-213ENST00000491421 CNOT2Q9NZN8 540 aaKnown RBP6.58□□□□□ -1.36
LSM2-213ENST00000491421 TSSC4Q9Y5U2 329 aaPredicted RBP6.58□□□□□ -1.36
LSM2-213ENST00000491421 A0A1W2PP11 408 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 A0A1W2PPE3 182 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 C15orf65H3BRN8 121 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 CCRL2O00421 344 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 SDCBPO00560 298 aaPredicted RBP6.57□□□□□ -1.36
LSM2-213ENST00000491421 ORC5O43913 435 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 PF4P02776 101 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 MAS1P04201 325 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 TMEM11P17152 192 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 CELP19835 753 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 CD33P20138 364 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 DIAPH2-AS1Q14236 149 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 HNF4GQ14541 408 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 OGFRL1Q5TC84 451 aaPredicted RBP6.57□□□□□ -1.36
LSM2-213ENST00000491421 AWAT2Q6E213 333 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 MZT2BQ6NZ67 158 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 GLIPR1L1Q6UWM5 242 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 ZNF497Q6ZNH5 498 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 REC114Q7Z4M0 266 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 OR8H3Q8N146 312 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 BPIFB6Q8NFQ5 453 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 OR52M1Q8NGK5 317 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 UBALD1Q8TB05 177 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 CCDC107Q8WV48 283 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 SGCDQ92629 289 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 MYDGFQ969H8 173 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 TRIM63Q969Q1 353 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 DERL3Q96Q80 235 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 VCXQ9H320 206 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 PSORS1C1Q9UIG5 152 aa6.57□□□□□ -1.36
LSM2-213ENST00000491421 DSCAML1Q8TD84 2053 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 IGHV1-3A0A0C4DH29 117 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 PSMB11A5LHX3 300 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 MCRIP1C9JLW8 97 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 CASQ2O14958 399 aaPredicted RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 IGKV1D-33P01593 117 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 IGKV1-33P01594 117 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 MT-ND4P03905 459 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 GAPDHP04406 335 aaKnown RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 MAPK3P27361 379 aaPredicted RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 REG1BP48304 166 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 WNT4P56705 351 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 ZNF816Q0VGE8 651 aaPredicted RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 DOC2BQ14184 412 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms