RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 IGHV3-43A0A0B4J1X8 118 aa6.55□□□□□ -1.36
APP-216ENST00000491395 IGHV3-72A0A0B4J1Y9 119 aa6.55□□□□□ -1.36
APP-216ENST00000491395 A0A1W2PPK0 400 aa6.55□□□□□ -1.36
APP-216ENST00000491395 WI2-2373I1.2A0A1W2PRP0 233 aa6.55□□□□□ -1.36
APP-216ENST00000491395 TMEM30CPA0ZSE6 113 aa6.55□□□□□ -1.36
APP-216ENST00000491395 MAGEA13PA6NCF6 341 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SERPINE3A8MV23 424 aa6.55□□□□□ -1.36
APP-216ENST00000491395 C15orf65H3BRN8 121 aa6.55□□□□□ -1.36
APP-216ENST00000491395 CCRL2O00421 344 aa6.55□□□□□ -1.36
APP-216ENST00000491395 HSD17B6O14756 317 aa6.55□□□□□ -1.36
APP-216ENST00000491395 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
APP-216ENST00000491395 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
APP-216ENST00000491395 MT-ND4P03905 459 aa6.55□□□□□ -1.36
APP-216ENST00000491395 CSTBP04080 98 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 GAPDHP04406 335 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 IGHV3-43DP0DP04 118 aa6.55□□□□□ -1.36
APP-216ENST00000491395 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
APP-216ENST00000491395 GZMHP20718 246 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SERPINA2P20848 420 aa6.55□□□□□ -1.36
APP-216ENST00000491395 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
APP-216ENST00000491395 RBM11P57052 281 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 RPL23AP62750 156 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 PPP3R1P63098 170 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SLC22A6Q4U2R8 563 aa6.55□□□□□ -1.36
APP-216ENST00000491395 NHLRC3Q5JS37 347 aa6.55□□□□□ -1.36
APP-216ENST00000491395 ATAD3CQ5T2N8 411 aa6.55□□□□□ -1.36
APP-216ENST00000491395 ETV3LQ6ZN32 361 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SLC16A12Q6ZSM3 486 aa6.55□□□□□ -1.36
APP-216ENST00000491395 OR8H3Q8N146 312 aa6.55□□□□□ -1.36
APP-216ENST00000491395 ZFP41Q8N8Y5 198 aa6.55□□□□□ -1.36
APP-216ENST00000491395 GHSRQ92847 366 aa6.55□□□□□ -1.36
APP-216ENST00000491395 ARL11Q969Q4 196 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SMIM19Q96E16 107 aa6.55□□□□□ -1.36
APP-216ENST00000491395 RBMXL1Q96E39 390 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 RCC1LQ96I51 464 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 S100A13Q99584 98 aa6.55□□□□□ -1.36
APP-216ENST00000491395 ZNF184Q99676 751 aaPredicted RBP6.55□□□□□ -1.36
APP-216ENST00000491395 IFT22Q9H7X7 185 aa6.55□□□□□ -1.36
APP-216ENST00000491395 SMPD3Q9NY59 655 aaPredicted RBP6.55□□□□□ -1.36
APP-216ENST00000491395 DIMT1Q9UNQ2 313 aaKnown RBP6.55□□□□□ -1.36
APP-216ENST00000491395 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
APP-216ENST00000491395 TRAV8-7A0A075B6U6 113 aa6.54□□□□□ -1.36
APP-216ENST00000491395 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
APP-216ENST00000491395 TRBV5-5A0A0J9YX44 114 aa6.54□□□□□ -1.36
APP-216ENST00000491395 NCBP2LA6PVI3 153 aaKnown RBP6.54□□□□□ -1.36
APP-216ENST00000491395 SDCBPO00560 298 aaPredicted RBP6.54□□□□□ -1.36
APP-216ENST00000491395 SLC31A2O15432 143 aa6.54□□□□□ -1.36
APP-216ENST00000491395 FGF16O43320 207 aa6.54□□□□□ -1.36
APP-216ENST00000491395 GPX5O75715 221 aa6.54□□□□□ -1.36
APP-216ENST00000491395 RPS11P62280 158 aaKnown RBP eCLIP6.54□□□□□ -1.36
APP-216ENST00000491395 ZNF816Q0VGE8 651 aaPredicted RBP6.54□□□□□ -1.36
APP-216ENST00000491395 RIPK1Q13546 671 aa6.54□□□□□ -1.36
APP-216ENST00000491395 EBI3Q14213 229 aa6.54□□□□□ -1.36
APP-216ENST00000491395 LRRC36Q1X8D7 754 aa6.54□□□□□ -1.36
APP-216ENST00000491395 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
APP-216ENST00000491395 DMKNQ6E0U4 476 aaPredicted RBP6.54□□□□□ -1.36
APP-216ENST00000491395 C8orf86Q6ZUL3 223 aa6.54□□□□□ -1.36
APP-216ENST00000491395 OR2W3Q7Z3T1 314 aa6.54□□□□□ -1.36
APP-216ENST00000491395 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
APP-216ENST00000491395 ZNF485Q8NCK3 441 aa6.54□□□□□ -1.36
APP-216ENST00000491395 NEK7Q8TDX7 302 aa6.54□□□□□ -1.36
APP-216ENST00000491395 CHPT1Q8WUD6 406 aa6.54□□□□□ -1.36
APP-216ENST00000491395 CYGBQ8WWM9 190 aa6.54□□□□□ -1.36
APP-216ENST00000491395 GGHQ92820 318 aa6.54□□□□□ -1.36
APP-216ENST00000491395 MUL1Q969V5 352 aa6.54□□□□□ -1.36
APP-216ENST00000491395 TMEM80Q96HE8 168 aa6.54□□□□□ -1.36
APP-216ENST00000491395 CYYR1Q96J86 154 aa6.54□□□□□ -1.36
APP-216ENST00000491395 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
APP-216ENST00000491395 PAK1IP1Q9NWT1 392 aaPredicted RBP6.54□□□□□ -1.36
APP-216ENST00000491395 GFOD1Q9NXC2 390 aa6.54□□□□□ -1.36
APP-216ENST00000491395 EXOSC1Q9Y3B2 195 aaKnown RBP6.54□□□□□ -1.36
APP-216ENST00000491395 TRBV5-7A0A0A0MS05 114 aa6.53□□□□□ -1.36
APP-216ENST00000491395 IRGMA1A4Y4 181 aa6.53□□□□□ -1.36
APP-216ENST00000491395 NUDT19A8MXV4 375 aa6.53□□□□□ -1.36
APP-216ENST00000491395 ZNF736B4DX44 427 aaPredicted RBP6.53□□□□□ -1.36
APP-216ENST00000491395 C12orf77C9JDV5 145 aa6.53□□□□□ -1.36
APP-216ENST00000491395 EBAG9O00559 213 aa6.53□□□□□ -1.36
APP-216ENST00000491395 ORC5O43913 435 aa6.53□□□□□ -1.36
APP-216ENST00000491395 ZNF780AO75290 641 aaPredicted RBP6.53□□□□□ -1.36
APP-216ENST00000491395 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
APP-216ENST00000491395 IGHG2P01859 326 aa6.53□□□□□ -1.36
APP-216ENST00000491395 GTF2F2P13984 249 aa6.53□□□□□ -1.36
APP-216ENST00000491395 MYL12AP19105 171 aa6.53□□□□□ -1.36
APP-216ENST00000491395 MYCNOSP40205 109 aa6.53□□□□□ -1.36
APP-216ENST00000491395 GPR12P47775 334 aa6.53□□□□□ -1.36
APP-216ENST00000491395 THBS3P49746 956 aa6.53□□□□□ -1.36
APP-216ENST00000491395 ZNF134P52741 427 aa6.53□□□□□ -1.36
APP-216ENST00000491395 MPV17LQ2QL34 196 aa6.53□□□□□ -1.36
APP-216ENST00000491395 Q499Y3 187 aa6.53□□□□□ -1.36
APP-216ENST00000491395 GLIPR1L1Q6UWM5 242 aa6.53□□□□□ -1.36
APP-216ENST00000491395 ZNF497Q6ZNH5 498 aa6.53□□□□□ -1.36
APP-216ENST00000491395 LINC00596Q86U02 117 aa6.53□□□□□ -1.36
APP-216ENST00000491395 TGIF2LXQ8IUE1 241 aa6.53□□□□□ -1.36
APP-216ENST00000491395 STPG2Q8N412 459 aa6.53□□□□□ -1.36
APP-216ENST00000491395 JAGN1Q8N5M9 183 aa6.53□□□□□ -1.36
APP-216ENST00000491395 LINC00311Q8N616 119 aa6.53□□□□□ -1.36
APP-216ENST00000491395 Q8N6K4 173 aa6.53□□□□□ -1.36
APP-216ENST00000491395 C8orf31Q8N9H6 132 aa6.53□□□□□ -1.36
APP-216ENST00000491395 OR51D1Q8NGF3 324 aa6.53□□□□□ -1.36
APP-216ENST00000491395 OR52M1Q8NGK5 317 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms