RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 MMP26Q9NRE1 261 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 C19orf12Q9NSK7 152 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 DUX4Q9UBX2 424 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 AMMECR1Q9Y4X0 333 aaPredicted RBP6.84□□□□□ -1.31
RNF38-209ENST00000491349 MYO9AB2RTY4 2548 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 NBPF19A0A087WUL8 3843 aa6.84□□□□□ -1.31
RNF38-209ENST00000491349 KBTBD11-OT1A0A1B0GTJ5 212 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 DPPA5A6NC42 116 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 SDCBPO00560 298 aaPredicted RBP6.83□□□□□ -1.32
RNF38-209ENST00000491349 HSPA12AO43301 675 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 HPGDSO60760 199 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 TPPPO94811 219 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 IFNA2P01563 188 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 MT-ND4P03905 459 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 GNB3P16520 340 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 PRTN3P24158 256 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 NFYBP25208 207 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 IL3RAP26951 378 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 CEACAM3P40198 252 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 EFNB2P52799 333 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 HACD4Q5VWC8 232 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 HEPN1Q6WQI6 88 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 VMO1Q7Z5L0 202 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 PRR18Q8N4B5 295 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 OR5H6Q8NGV6 325 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 OR4K15Q8NH41 348 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 DYNC2LI1Q8TCX1 351 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 LHX4Q969G2 390 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 COQ2Q96H96 371 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 DIRAS2Q96HU8 199 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 SULT4A1Q9BR01 284 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 TMPRSS13Q9BYE2 586 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.83□□□□□ -1.32
RNF38-209ENST00000491349 CALYQ9NYX4 217 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 IDI2-AS1Q9NZ38 188 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 GNG12Q9UBI6 72 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 AK3Q9UIJ7 227 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 NUP50Q9UKX7 468 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 MRPS7Q9Y2R9 242 aaKnown RBP6.83□□□□□ -1.32
RNF38-209ENST00000491349 SESN1Q9Y6P5 492 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 A3GALT2U3KPV4 340 aa6.83□□□□□ -1.32
RNF38-209ENST00000491349 ITPR3Q14573 2671 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 DSCAML1Q8TD84 2053 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 BTBD17A6NE02 478 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 RAB27BO00194 218 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 CTXN2P0C2S0 81 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 IGHV1-8P0DP01 117 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 CCL3L1P16619 93 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 DTYMKP23919 212 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 CDK2P24941 298 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 PRSS3P35030 304 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 ARPC4P59998 168 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 MRPS10P82664 201 aaKnown RBP6.82□□□□□ -1.32
RNF38-209ENST00000491349 PAX2Q02962 417 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 IL18Q14116 193 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 ZNF273Q14593 569 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 SRSF7Q16629 238 aaKnown RBP eCLIP6.82□□□□□ -1.32
RNF38-209ENST00000491349 SPANXN2Q5MJ10 180 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 STEAP3Q658P3 488 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 SIGIRRQ6IA17 410 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
RNF38-209ENST00000491349 OR52M1Q8NGK5 317 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 IL1F10Q8WWZ1 152 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 SMR3AQ99954 134 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 GINS4Q9BRT9 223 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 CLEC7AQ9BXN2 247 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 TMEM133Q9H2Q1 129 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 ZMAT3Q9HA38 289 aaKnown RBP6.82□□□□□ -1.32
RNF38-209ENST00000491349 TAF9BQ9HBM6 251 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 SIRT7Q9NRC8 400 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 EXTL2Q9UBQ6 330 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
RNF38-209ENST00000491349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.82□□□□□ -1.328e-18■■■■□ 24.9
RNF38-209ENST00000491349 MED13LQ71F56 2210 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 A0A0A6YYD4 124 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 TRDCB7Z8K6 153 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 SULT1C2O00338 296 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 MFNGO00587 321 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 HBZP02008 142 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 ARG1P05089 322 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 EIF4EP06730 217 aaKnown RBP6.81□□□□□ -1.32
RNF38-209ENST00000491349 ELK1P19419 428 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 EPHA1P21709 976 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 ZBTB25P24278 435 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 UBE2E1P51965 193 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 TMEM50BP56557 158 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 TAS2R20P59543 309 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 ACTBP60709 375 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 ACTG1P63261 375 aa6.81□□□□□ -1.32
RNF38-209ENST00000491349 HLA-DRB3P79483 266 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms