RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	GNG10	P50151	68 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	GTF2A1	P52655	376 aa	Predicted RBP	14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	GP2	P55259	537 aa	Known RBP	14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	RBM11	P57052	281 aa	Known RBP	14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	KRTAP10-11	P60412	298 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	GPR176	Q14439	515 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	LTC4S	Q16873	150 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	TGIF2LX	Q8IUE1	241 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	OR10K1	Q8NGX5	313 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	RAB9B	Q9NP90	201 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	ING4	Q9UNL4	249 aa		14.17	□□□□□ -0.14
GGA1-223	ENST00000491295	IGHV1-3	A0A0C4DH29	117 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	HSD17B6	O14756	317 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	CDRT1	O95170	752 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	BDKRB2	P30411	391 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	DIAPH2-AS1	Q14236	149 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	HNF4G	Q14541	408 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	TEX38	Q6PEX7	206 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	UNQ9370/PRO34162	Q6UXP9	181 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	ETV3L	Q6ZN32	361 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	IZUMO1	Q8IYV9	350 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	STPG2	Q8N412	459 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	OR2T10	Q8NGZ9	312 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	RGP1	Q92546	391 aa	Predicted RBP	14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	ARL11	Q969Q4	196 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	NOL4L	Q96MY1	436 aa	Predicted RBP	14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	RDH12	Q96NR8	316 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	SLC29A1	Q99808	456 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	SPACA1	Q9HBV2	294 aa		14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	LIN7C	Q9NUP9	197 aa	Known RBP	14.16	□□□□□ -0.14
GGA1-223	ENST00000491295	WI2-2373I1.2	A0A1W2PRP0	233 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	NUDT19	A8MXV4	375 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	C15orf65	H3BRN8	121 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	AP4M1	O00189	453 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	OGG1	O15527	345 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	GPX5	O75715	221 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	GTF2F2	P13984	249 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	IL3RA	P26951	378 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	CD1B	P29016	333 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	TMEM30B	Q3MIR4	351 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	DDI2	Q5TDH0	399 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	MOB3B	Q86TA1	216 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	STX19	Q8N4C7	294 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	ZNF555	Q8NEP9	628 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	OR8H1	Q8NGG4	311 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	APH1B	Q8WW43	257 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	MRPS24	Q96EL2	167 aa	Known RBP	14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	EAF1	Q96JC9	268 aa	Predicted RBP	14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	P2RX4	Q99571	388 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	ABCG5	Q9H222	651 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	BABAM2	Q9NXR7	383 aa		14.15	□□□□□ -0.14
GGA1-223	ENST00000491295	SDCBP	O00560	298 aa	Predicted RBP	14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	GEMIN2	O14893	280 aa	Known RBP	14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	TXNL1	O43396	289 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	PNLIPRP3	Q17RR3	467 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	ZNF695	Q8IW36	515 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295		Q8N6K4	173 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	SMIM19	Q96E16	107 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	S100A14	Q9HCY8	104 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	GFOD1	Q9NXC2	390 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	CKLF	Q9UBR5	152 aa		14.14	□□□□□ -0.15
GGA1-223	ENST00000491295	NCBP2L	A6PVI3	153 aa	Known RBP	14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	MT-ND4	P03905	459 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	SERPINA2	P20848	420 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	HOXD3	P31249	432 aa	Predicted RBP	14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	ETV1	P50549	477 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	MED21	Q13503	144 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	RIPK1	Q13546	671 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	ATAD3C	Q5T2N8	411 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	STEAP3	Q658P3	488 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	ZNF497	Q6ZNH5	498 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	C8orf86	Q6ZUL3	223 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	CDH26	Q8IXH8	852 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	PQLC1	Q8N2U9	271 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	KLHL30-AS1	Q8NEE0	82 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	ST6GALNAC6	Q969X2	333 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	B9D2	Q9BPU9	175 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	COL7A1	Q02388	2944 aa		14.13	□□□□□ -0.15
GGA1-223	ENST00000491295	TRAV39	A0A0B4J263	110 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295		A0A1W2PPE3	182 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	MCRIP1	C9JLW8	97 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295		H0YHG0	523 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	RRP9	O43818	475 aa	Known RBP	14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	RAMP3	O60896	148 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	WBP4	O75554	376 aa	Known RBP	14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	MOS	P00540	346 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	IGFBP3	P17936	291 aa	Predicted RBP	14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	MYL12A	P19105	171 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	GPR12	P47775	334 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	ZNF137P	P52743	207 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	CD69	Q07108	199 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	YIF1B	Q5BJH7	314 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	XAF1	Q6GPH4	301 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295		Q8N9W7	124 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	TMEM104	Q8NE00	496 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	NEK7	Q8TDX7	302 aa		14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	ZNF184	Q99676	751 aa	Predicted RBP	14.12	□□□□□ -0.15
GGA1-223	ENST00000491295	DIMT1	Q9UNQ2	313 aa	Known RBP	14.12	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms