RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 IL36GQ9NZH8 169 aa15.63■□□□□ 0.09
SREBF1-216ENST00000490796 CKLFQ9UBR5 152 aa15.63■□□□□ 0.09
SREBF1-216ENST00000490796 NCBP2LA6PVI3 153 aaKnown RBP15.62■□□□□ 0.09
SREBF1-216ENST00000490796 SDCBPO00560 298 aaPredicted RBP15.62■□□□□ 0.09
SREBF1-216ENST00000490796 ZNF780AO75290 641 aaPredicted RBP15.62■□□□□ 0.09
SREBF1-216ENST00000490796 BAG2O95816 211 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 IL3RAP26951 378 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 RPL23AP62750 156 aaKnown RBP15.62■□□□□ 0.09
SREBF1-216ENST00000490796 MED21Q13503 144 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 NHLRC3Q5JS37 347 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 COMMD1Q8N668 190 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 LINC00482Q8N8I6 264 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 APH1BQ8WW43 257 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 MCRIP2Q9BUT9 160 aaKnown RBP15.62■□□□□ 0.09
SREBF1-216ENST00000490796 IFT22Q9H7X7 185 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 ZFP57Q9NU63 452 aa15.62■□□□□ 0.09
SREBF1-216ENST00000490796 K7EIL1 84 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 GEMIN2O14893 280 aaKnown RBP15.61■□□□□ 0.09
SREBF1-216ENST00000490796 SLC6A1P30531 599 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 REG1BP48304 166 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 ETV1P50549 477 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 RIPK1Q13546 671 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 SMN1Q16637 294 aaKnown RBP15.61■□□□□ 0.09
SREBF1-216ENST00000490796 MPV17LQ2QL34 196 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 SLC22A6Q4U2R8 563 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 OR2W3Q7Z3T1 314 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 MRPL41Q8IXM3 137 aaKnown RBP15.61■□□□□ 0.09
SREBF1-216ENST00000490796 CCDC107Q8WV48 283 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 RAB9BQ9NP90 201 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 BABAM2Q9NXR7 383 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 SMPD3Q9NY59 655 aaPredicted RBP15.61■□□□□ 0.09
SREBF1-216ENST00000490796 LINC00527Q9UJ94 153 aa15.61■□□□□ 0.09
SREBF1-216ENST00000490796 IGHV1-3A0A0C4DH29 117 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 GTF2F2P13984 249 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 HOXD3P31249 432 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-216ENST00000490796 ZNF816Q0VGE8 651 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-216ENST00000490796 GPR176Q14439 515 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 OR2G6Q5TZ20 316 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 XAF1Q6GPH4 301 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 UNQ9370/PRO34162Q6UXP9 181 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 KLHL30-AS1Q8NEE0 82 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 OR52M1Q8NGK5 317 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 OR2T10Q8NGZ9 312 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 SMIM19Q96E16 107 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 ZNF581Q9P0T4 197 aa15.6■□□□□ 0.09
SREBF1-216ENST00000490796 EXOSC1Q9Y3B2 195 aaKnown RBP15.6■□□□□ 0.09
SREBF1-216ENST00000490796 IGHV3-72A0A0B4J1Y9 119 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 AIPO00170 330 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 IGHG2P01859 326 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 THBS3P49746 956 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 C8orf86Q6ZUL3 223 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 UBALD1Q8TB05 177 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 EAF1Q96JC9 268 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-216ENST00000490796 RDH12Q96NR8 316 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 ZNF184Q99676 751 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-216ENST00000490796 GON7Q9BXV9 100 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 SPACA1Q9HBV2 294 aa15.59■□□□□ 0.09
SREBF1-216ENST00000490796 ZMAT5Q9UDW3 170 aaKnown RBP15.59■□□□□ 0.09
SREBF1-216ENST00000490796 IGHV3-43A0A0B4J1X8 118 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 WI2-2373I1.2A0A1W2PRP0 233 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 MCRIP1C9JLW8 97 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 AP4M1O00189 453 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 OGG1O15527 345 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 ORC5O43913 435 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 WBP4O75554 376 aaKnown RBP15.58■□□□□ 0.08
SREBF1-216ENST00000490796 IGHV3-43DP0DP04 118 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 MYCNOSP40205 109 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 KRTAP10-11P60412 298 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 VAX1Q5SQQ9 334 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 TGIF2LXQ8IUE1 241 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 STPG2Q8N412 459 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 GHSRQ92847 366 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 ORAI1Q96D31 301 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 GFOD1Q9NXC2 390 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 TRAPPC2LQ9UL33 140 aa15.58■□□□□ 0.08
SREBF1-216ENST00000490796 SPINT2O43291 252 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 RAB25P57735 213 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 Q499Y3 187 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 TEX38Q6PEX7 206 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 ETV3LQ6ZN32 361 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 ZNF695Q8IW36 515 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 IZUMO1Q8IYV9 350 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 JAGN1Q8N5M9 183 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 LINC00311Q8N616 119 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 OR13C5Q8NGS8 318 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 CYGBQ8WWM9 190 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 RASL11BQ9BPW5 248 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 GNG12Q9UBI6 72 aa15.57■□□□□ 0.08
SREBF1-216ENST00000490796 DIMT1Q9UNQ2 313 aaKnown RBP15.57■□□□□ 0.08
SREBF1-216ENST00000490796 SIRT4Q9Y6E7 314 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-216ENST00000490796 C15orf65H3BRN8 121 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 RRP9O43818 475 aaKnown RBP15.56■□□□□ 0.08
SREBF1-216ENST00000490796 MT-ND4P03905 459 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 CD69Q07108 199 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 EGFEM1PQ0D2K5 195 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 DCTN2Q13561 401 aaKnown RBP15.56■□□□□ 0.08
SREBF1-216ENST00000490796 EBI3Q14213 229 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 PNLIPRP3Q17RR3 467 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 YIF1BQ5BJH7 314 aa15.56■□□□□ 0.08
SREBF1-216ENST00000490796 CXorf66Q5JRM2 361 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms