RNA–Protein interactions for RNA: ENST00000490788.1

HMGB1-208, Transcript of high mobility group box 1, humanhuman

TSL 2

Gene HMGB1, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-208ENST00000490788 SULT1A3P0DMM9 295 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SULT1A4P0DMN0 295 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 PPIAL4FP0DN26 164 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GZMBP10144 247 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 UROSP10746 265 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 LIPCP11150 499 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 B4GALT1P15291 398 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 UGT2B7P16662 529 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 AKR1C4P17516 323 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ADCYAP1P18509 176 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 CSNK2A2P19784 350 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 CXCL3P19876 107 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 MSR1P21757 451 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SLC2A5P22732 501 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 KDELR1P24390 212 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 FASP25445 335 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 DPP4P27487 766 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 HTR1EP28566 365 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 S100GP29377 79 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ADORA1P30542 326 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 AKT2P31751 481 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OTX1P32242 354 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GGT2P36268 569 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 AQP2P41181 271 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GLP1RP43220 463 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 MAGEA3P43357 314 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 MAGEA12P43365 314 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RGRP47804 291 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 CYB561P49447 251 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 UCP2P55851 309 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RAG2P55895 527 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RPS20P60866 119 aaKnown RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 S100A10P60903 97 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RPL27P61353 136 aaKnown RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RANP62826 216 aaKnown RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 BTN3A2P78410 334 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 PITPNAQ00169 270 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZP4Q12836 540 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GINS1Q14691 196 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GNMTQ14749 295 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 JOSD1Q15040 202 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RAB35Q15286 201 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF79Q15937 498 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SGCBQ16585 318 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 TAF9Q16594 264 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GSG1Q2KHT4 349 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 C18orf21Q32NC0 220 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 PLPPR5Q32ZL2 321 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ANKRD55Q3KP44 614 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 PRR30Q53SZ7 412 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 C5orf47Q569G3 176 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SPIN3Q5JUX0 258 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 CLLU1OSQ5K130 101 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SPATA46Q5T0L3 261 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 C10orf91Q5T1B1 145 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 IDNKQ5T6J7 187 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 TPTE2P1Q5T6R2 138 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 HENMT1Q5T8I9 393 aaKnown RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 BCL2L15Q5TBC7 163 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 HIST2H3PS2Q5TEC6 136 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 TMEM244Q5VVB8 128 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 NKAIN2Q5VXU1 208 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 RAET1LQ5VY80 246 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF660Q6AZW8 331 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 FAM45BPQ6NSW5 357 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 TBPL2Q6SJ96 375 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ENPP6Q6UWR7 440 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 APOOLQ6UXV4 268 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF562Q6V9R5 426 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 C12orf54Q6X4T0 127 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ASCL4Q6XD76 172 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 TMPPEQ6ZT21 453 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 H2AFVQ71UI9 128 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 GOLGA7Q7Z5G4 137 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 PARGQ86W56 976 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 LINC00471Q8N535 108 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SMIM20Q8N5G0 67 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 C2orf73Q8N5S3 287 aaPredicted RBP1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ACBD7Q8N6N7 88 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZNRF1Q8ND25 227 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 DUSP18Q8NEJ0 188 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF555Q8NEP9 628 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR7G2Q8NG99 324 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR4F15Q8NGB8 312 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR4E2Q8NGC2 313 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR10G3Q8NGC4 313 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR2AP1Q8NGE2 309 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR4P4Q8NGL7 312 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR4D5Q8NGN0 318 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR13C8Q8NGS7 320 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR2A12Q8NGT7 310 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR9A4Q8NGU2 314 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR2T35Q8NGX2 323 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR10X1Q8NGY0 326 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR6N1Q8NGY5 312 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR51Q1Q8NH59 317 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR51A7Q8NH64 312 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR10A6Q8NH74 314 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 OR5AK3PQ8NH89 298 aa1.61□□□□□ -2.15
HMGB1-208ENST00000490788 SGMS2Q8NHU3 365 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms