RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	C2orf76	Q3KRA6	126 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	ABHD12	Q8N2K0	398 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	BEND2	Q8NDZ0	799 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	NDNF	Q8TB73	568 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	GCDH	Q92947	438 aa	Predicted RBP	15.04	■□□□□ -0
C4A-256	ENST00000490663	SSX3	Q99909	188 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	FAAP24	Q9BTP7	215 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	CENPO	Q9BU64	300 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	ZNF696	Q9H7X3	374 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	STEAP1	Q9UHE8	339 aa		15.04	■□□□□ -0
C4A-256	ENST00000490663	FAM90A10P	A6NDY2	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A18P	A6NE21	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A16P	A6NEW6	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A20P	A6NIJ5	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A8P	A6NJQ4	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A7P	A6NKC0	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A22P	A8MWA6	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A12P	A8MX19	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A5P	A8MXJ8	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A23P	A8MXZ1	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	GPR137B	O60478	399 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A15P	P0C7V4	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A13P	P0C7W8	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A14P	P0C7W9	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM90A24P	P0C7X0	464 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	RCC1	P18754	421 aa	Predicted RBP	15.03	■□□□□ -0
C4A-256	ENST00000490663	BLVRB	P30043	206 aa	Predicted RBP	15.03	■□□□□ -0
C4A-256	ENST00000490663	VEGFC	P49767	419 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	RAB13	P51153	203 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	EFNB2	P52799	333 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	PAX5	Q02548	391 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	MXD1	Q05195	221 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	RBM39	Q14498	530 aa	Known RBP	15.03	■□□□□ -0
C4A-256	ENST00000490663	FAM189A2	Q15884	450 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	C16orf87	Q6PH81	154 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	OR4P4	Q8NGL7	312 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	TM2D1	Q9BX74	207 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	ZMAT3	Q9HA38	289 aa	Known RBP	15.03	■□□□□ -0
C4A-256	ENST00000490663	SPACA1	Q9HBV2	294 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	DNHD1	Q96M86	4753 aa		15.03	■□□□□ -0
C4A-256	ENST00000490663	IFITM5	A6NNB3	132 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	SMIM18	P0DKX4	95 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	GAL	P22466	123 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	FGF9	P31371	208 aa	Predicted RBP	15.02	■□□□□ -0
C4A-256	ENST00000490663	RELB	Q01201	579 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	LRRC75B	Q2VPJ9	315 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663		Q6ZPA2	131 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	OR2W3	Q7Z3T1	314 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	PRR18	Q8N4B5	295 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	ZNF565	Q8N9K5	539 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	MRPL30	Q8TCC3	161 aa	Known RBP	15.02	■□□□□ -0
C4A-256	ENST00000490663	ARL11	Q969Q4	196 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	NEDD4L	Q96PU5	975 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	HDHD3	Q9BSH5	251 aa	Predicted RBP	15.02	■□□□□ -0
C4A-256	ENST00000490663	TRAPPC2L	Q9UL33	140 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	TBL2	Q9Y4P3	447 aa	Known RBP	15.02	■□□□□ -0
C4A-256	ENST00000490663	POMT1	Q9Y6A1	747 aa		15.02	■□□□□ -0
C4A-256	ENST00000490663	TMEM89	A2RUT3	159 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	C12orf77	C9JDV5	145 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	C15orf65	H3BRN8	121 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	LDLRAD4	O15165	306 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	HKR1	P10072	659 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	SDC2	P34741	201 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	LSM3	P62310	102 aa	Known RBP	15.01	□□□□□ -0.01
C4A-256	ENST00000490663	OLFML2A	Q68BL7	652 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	OR52W1	Q6IF63	320 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	TMEM86B	Q8N661	226 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	OR1L1	Q8NH94	360 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	DPAGT1	Q9H3H5	408 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	NCOR1P1	Q9H4R4	102 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	LIN7B	Q9HAP6	207 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	VPREB3	Q9UKI3	123 aa		15.01	□□□□□ -0.01
C4A-256	ENST00000490663	BTBD17	A6NE02	478 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	NPIPB11	E5RHQ5	1161 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	IGLV1-47	P01700	117 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	CD34	P28906	385 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	MOGAT2	Q3SYC2	334 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	FBLN7	Q53RD9	439 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	SPATA3	Q8NHX4	192 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	SETD6	Q8TBK2	473 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	YIPF6	Q96EC8	236 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	URM1	Q9BTM9	101 aa	Known RBP	15	□□□□□ -0.01
C4A-256	ENST00000490663	MEGF9	Q9H1U4	602 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	C1RL	Q9NZP8	487 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	PSG11	Q9UQ72	335 aa		15	□□□□□ -0.01
C4A-256	ENST00000490663	TRIM64C	A6NLI5	447 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	FOXI3	A8MTJ6	420 aa	Predicted RBP	14.99	□□□□□ -0.01
C4A-256	ENST00000490663	SDCBP	O00560	298 aa	Predicted RBP	14.99	□□□□□ -0.01
C4A-256	ENST00000490663	TOR1A	O14656	332 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	SNRPB	P14678	240 aa	Known RBP	14.99	□□□□□ -0.01
C4A-256	ENST00000490663	MDK	P21741	143 aa	Predicted RBP	14.99	□□□□□ -0.01
C4A-256	ENST00000490663	CD24	P25063	80 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	HTR1D	P28221	377 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	TMEM50B	P56557	158 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	HLA-DRB5	Q30154	266 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	AWAT1	Q58HT5	328 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	C12orf54	Q6X4T0	127 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	TMEM219	Q86XT9	240 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	OR10V1	Q8NGI7	309 aa		14.99	□□□□□ -0.01
C4A-256	ENST00000490663	PIFO	Q8TCI5	191 aa		14.99	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms