RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MTUS2Q5JR59 1369 aa2.84□□□□□ -1.96
HMGB1P38-201ENST00000490557 DENND4AQ7Z401 1863 aa2.84□□□□□ -1.96
HMGB1P38-201ENST00000490557 LRP4O75096 1905 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 NOTCH2Q04721 2471 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 EVPLLA8MZ36 301 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF878C9JN71 531 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 H3BP45 60 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 PSPHP1O15172 72 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 CHP2O43745 196 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 ARL6IP5O75915 188 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 CISD3P0C7P0 127 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TLX1NBP0CAT3 122 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 GTF2F2P13984 249 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 GABRA1P14867 456 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 RPL5P46777 297 aaKnown RBP2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF138P52744 262 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 CRYBA4P53673 196 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SYNJ2BPP57105 145 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 GTF2BQ00403 316 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 C1DQ13901 141 aaKnown RBP2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SMCO1Q147U7 214 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM162BQ5T6X4 162 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM236Q5W0B7 351 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 FBXW9Q5XUX1 488 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 PLET1Q6UQ28 207 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 OLIG3Q7RTU3 272 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 NAA40Q86UY6 237 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 MUC15Q8N387 334 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SLC26A10Q8NG04 563 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR2Z1Q8NG97 314 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR1L8Q8NGR8 309 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR10G6Q8NH81 332 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 COQ8AQ8NI60 647 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 RXFP4Q8TDU9 374 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SLC35B4Q969S0 331 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMBIM1Q969X1 311 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TAMM41Q96BW9 452 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TM4SF18Q96CE8 201 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SMARCD1Q96GM5 515 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SFRP2Q96HF1 295 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 FMC1Q96HJ9 113 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR2V2Q96R30 315 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 SFXN3Q9BWM7 321 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 CHST5Q9GZS9 411 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM107BQ9H098 131 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 BOLA2Q9H3K6 86 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 C12orf10Q9HB07 376 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 DOK5Q9P104 306 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 GLS2Q9UI32 602 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 PRELID3BQ9Y3B1 194 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM32AQ9Y421 112 aaKnown RBP2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 ENPP4Q9Y6X5 453 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 NRCAMQ92823 1304 aa2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 NPHP4O75161 1426 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF608Q9ULD9 1512 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P38-201ENST00000490557 TEX50A0A1B0GTY4 177 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 A0A1B0GXF2 115 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM183AA6NL82 134 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 PDCD6O75340 191 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TRBV12-3P01733 135 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 CD79AP11912 226 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 MIPP30301 263 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 SLC6A1P30531 599 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 SERPINB1P30740 379 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TAS2R41P59536 307 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ADIGQ0VDE8 80 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 RBMY1FQ15415 496 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TSNQ15631 228 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 C6orf99Q4VX62 202 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ATP6AP1LQ52LC2 224 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TRMT12Q53H54 448 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 PYCR3Q53H96 274 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TCEAL5Q5H9L2 206 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF684Q5T5D7 378 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 KDM4DQ6B0I6 523 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ARL9Q6T311 187 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM144Q7Z5S9 345 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 GALNT10Q86SR1 603 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZCCHC24Q8N2G6 241 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 SLC35G3Q8N808 338 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM35BQ8NCS4 154 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR10D3Q8NH80 312 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 SPPL2BQ8TCT7 592 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF721Q8TF20 911 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TCEAL3Q969E4 200 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 LRRC58Q96CX6 371 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 DCUN1D1Q96GG9 259 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 MED18Q9BUE0 208 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 MRPL20Q9BYC9 149 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 PARP12Q9H0J9 701 aaKnown RBP2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 SPNS1Q9H2V7 528 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ENY2Q9NPA8 101 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 PARVAQ9NVD7 372 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ARMC1Q9NVT9 282 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 TAS2R5Q9NYW4 299 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 VPREB3Q9UKI3 123 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF835Q9Y2P0 537 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 NDUFAF1Q9Y375 327 aa2.82□□□□□ -1.96
HMGB1P38-201ENST00000490557 PBRM1Q86U86 1689 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms