RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 REM1O75628 298 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 CYB5R3P00387 301 aaPredicted RBP2.25□□□□□ -2.05
UBXN4-208ENST00000490163 IFNA6P05013 189 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 C8GP07360 202 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 MPGP29372 298 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 S100A7P31151 101 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 PMELP40967 661 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 GABRA4P48169 554 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 DIO3P55073 304 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 PITPNAQ00169 270 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 ST3GAL3Q11203 375 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 SCN5AQ14524 2016 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 FAM219BQ5XKK7 198 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 MED27Q6P2C8 311 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 GDPD4Q6W3E5 623 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 TRAPPC5Q8IUR0 188 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 BAP18Q8IXM2 172 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 OR6V1Q8N148 313 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 METTL27Q8N6F8 245 aaPredicted RBP2.25□□□□□ -2.05
UBXN4-208ENST00000490163 LMNTD1Q8N9Z9 388 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 HSD17B11Q8NBQ5 300 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 JOSD2Q8TAC2 188 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 NEIL3Q8TAT5 605 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 TNFAIP8L1Q8WVP5 186 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 PHYHIPLQ96FC7 376 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 SEC22AQ96IW7 307 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 OR5B2Q96R09 309 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 TAAR1Q96RJ0 339 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 URM1Q9BTM9 101 aaKnown RBP2.25□□□□□ -2.05
UBXN4-208ENST00000490163 GABARAPL3Q9BY60 117 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 HEBP1Q9NRV9 189 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 UQCC1Q9NVA1 299 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 KPTNQ9Y664 436 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 PLXNB3Q9ULL4 1909 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 DOCK3Q8IZD9 2030 aa2.25□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF106Q9H2Y7 1883 aaKnown RBP2.25□□□□□ -2.05
UBXN4-208ENST00000490163 IGHV3-35A0A0C4DH35 117 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 KLLNB2CW77 178 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF749O43361 778 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SH3BGRLO75368 114 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 DIRAS1O95057 198 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC25A27O95847 323 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RENP00797 406 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MT-ND4P03905 459 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 P04436 131 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 F7P08709 466 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PIPP12273 146 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FABP4P15090 132 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PVRP15151 417 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 HIST1H1CP16403 213 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 IL1RNP18510 177 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 HTR2CP28335 458 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 AKR1C3P42330 323 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC1A2P43004 574 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TTPAP49638 278 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CAV3P56539 151 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF616Q08AN1 781 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GUK1Q16774 197 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ACTL10Q5JWF8 245 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ADAMTSL4-AS1Q5T5F5 129 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM244Q5VVB8 128 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 IL34Q6ZMJ4 242 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RPS27LQ71UM5 84 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FAM19A5Q7Z5A7 132 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ANGPTL5Q86XS5 388 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SAMD12Q8N8I0 201 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR10G2Q8NGC3 310 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR52E4Q8NGH9 312 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 LCN9Q8WX39 176 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CDS1Q92903 461 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZFP3Q96NJ6 502 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PHB2Q99623 299 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SAMD10Q9BYL1 202 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MIEF1Q9NQG6 463 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FBXO7Q9Y3I1 522 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RPL36Q9Y3U8 105 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RBM7Q9Y580 266 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TRAV9-2A0A087WT02 112 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 NAP1L6A6NFF2 107 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GGT3PA6NGU5 568 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 BLOC1S5-TXNDC5H3BN57 136 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TNFRSF11BO00300 401 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GALR3O60755 368 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ENTPD6O75354 484 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MPZL1O95297 269 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC2A10O95528 541 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 HLA-DPB1P04440 258 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CYBAP13498 195 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ADCYAP1P18509 176 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PSMB1P20618 241 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC2A5P22732 501 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 LMO2P25791 158 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 STXBP1P61764 594 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC7A9P82251 487 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FHL2Q14192 279 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GINS1Q14691 196 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RHEBQ15382 184 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 BATFQ16520 125 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms