RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 SGCZQ96LD1 299 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
TNXB-206ENST00000490077 ARPC4-TTLL3A0A0A6YYG9 625 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 PQLC2LA1A4F0 135 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 K7N7A8 449 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 SIRPB1O00241 398 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 CNOT4O95628 575 aaKnown RBP11.3□□□□□ -0.6
TNXB-206ENST00000490077 CXCL1P09341 107 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 PET100P0DJ07 73 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 SULT1A1P50225 295 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 RND3P61587 244 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 ZNF695Q8IW36 515 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 SSX3Q99909 188 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
TNXB-206ENST00000490077 SUCNR1Q9BXA5 334 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 RGCCQ9H4X1 137 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 Q9N2K0 584 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 TNRC6AQ8NDV7 1962 aaKnown RBP11.3□□□□□ -0.6
TNXB-206ENST00000490077 GPR137BO60478 399 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 IGLV2-14P01704 120 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 CD55P08174 381 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
TNXB-206ENST00000490077 MEOX2P50222 304 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 ZNF826PQ6ZT77 177 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 BEND4Q6ZU67 534 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 SUMF2Q8NBJ7 301 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 FAM212BQ9NTI7 297 aaPredicted RBP11.29□□□□□ -0.6
TNXB-206ENST00000490077 TRDCB7Z8K6 153 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 WNT9BO14905 357 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 CYTIPO60759 359 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 MT-CO3P00414 261 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 DTYMKP23919 212 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 RPS23P62266 143 aaKnown RBP11.29□□□□□ -0.6
TNXB-206ENST00000490077 ZDHHC23Q8IYP9 409 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 LGI3Q8N145 548 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 OR2M7Q8NG81 312 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
TNXB-206ENST00000490077 OTOGLQ3ZCN5 2332 aa11.29□□□□□ -0.6
TNXB-206ENST00000490077 IFITM10A6NMD0 228 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 OR8U8P0C7N1 319 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 LMO1P25800 156 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 UTF1Q5T230 341 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 WDYHV1Q96HA8 205 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 TNCP24821 2201 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 NAPSAO96009 420 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 GAPDHP04406 335 aaKnown RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 EIF2S3LQ2VIR3 472 aaKnown RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 DPPA2Q7Z7J5 298 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 HAPLN4Q86UW8 402 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 C1orf210Q8IVY1 113 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 MRPL30Q8TCC3 161 aaKnown RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 EDARQ9UNE0 448 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 ACACAQ13085 2346 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 RPL36A-HNRNPH2H7BZ11 118 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 TAAR5O14804 337 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
TNXB-206ENST00000490077 POMT1Q9Y6A1 747 aa11.28□□□□□ -0.6
TNXB-206ENST00000490077 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 OR1C1Q15619 314 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 COLCA1Q6ZS62 124 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
TNXB-206ENST00000490077 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 C5orf52A6NGY3 159 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 SOX15O60248 233 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 IL18BPO95998 194 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 MMP9P14780 707 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 PTAFRP25105 342 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 GLP1RP43220 463 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 NMSQ5H8A3 153 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 BIN3Q9NQY0 253 aa11.27□□□□□ -0.61
TNXB-206ENST00000490077 RAMP3O60896 148 aa11.26□□□□□ -0.61
TNXB-206ENST00000490077 WDR1O75083 606 aa11.26□□□□□ -0.61
TNXB-206ENST00000490077 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms