RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZCCHC4Q9H5U6 513 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 VSIG4Q9Y279 399 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 OVOL1O14753 267 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 SAP30O75446 220 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 OR5H8P0DN80 308 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 T-ENOLP0DO92 83 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 RUNX1Q01196 453 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 PAX5Q02548 391 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 KISS1Q15726 138 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 ZSCAN26Q16670 478 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 ELP2Q6IA86 826 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 FAM71E2Q8N5Q1 922 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 LINC00311Q8N616 119 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 OR8H1Q8NGG4 311 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 FAM118AQ9NWS6 357 aa10.83□□□□□ -0.68
VARS-227ENST00000489979 TCRBV3S1A0A5B6 114 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 IL3RAP26951 378 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 KCNJ3P48549 501 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 GNGT1P63211 74 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 GABPB1Q06547 395 aaPredicted RBP10.82□□□□□ -0.68
VARS-227ENST00000489979 FLOT2Q14254 428 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 IL13RA2Q14627 380 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 ZNF691Q5VV52 312 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 FDX2Q6P4F2 183 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 TMEM65Q6PI78 240 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 UBALD1Q8TB05 177 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 ZNF107Q9UII5 783 aaPredicted RBP10.82□□□□□ -0.68
VARS-227ENST00000489979 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 WSB1Q9Y6I7 421 aa10.82□□□□□ -0.68
VARS-227ENST00000489979 IGHV3-43A0A0B4J1X8 118 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 G3V318 75 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 SDCBPO00560 298 aaPredicted RBP10.81□□□□□ -0.68
VARS-227ENST00000489979 HTR1AP08908 422 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 IGHV3-43DP0DP04 118 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 SLC2A2P11168 524 aaPredicted RBP10.81□□□□□ -0.68
VARS-227ENST00000489979 MYF6P23409 242 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
VARS-227ENST00000489979 CCR9P51686 369 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 SRSF7Q16629 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
VARS-227ENST00000489979 PIGYQ3MUY2 71 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 LPCAT4Q643R3 524 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 KDM4DQ6B0I6 523 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 SUMF2Q8NBJ7 301 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 PXT1Q8NFP0 134 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 OR52M1Q8NGK5 317 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 OR6Q1Q8NGQ2 317 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 OR10K1Q8NGX5 313 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 DLX4Q92988 240 aaPredicted RBP10.81□□□□□ -0.68
VARS-227ENST00000489979 ARL11Q969Q4 196 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 EME1Q96AY2 570 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 CHCHD6Q9BRQ6 235 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 DPCDQ9BVM2 203 aaPredicted RBP10.81□□□□□ -0.68
VARS-227ENST00000489979 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
VARS-227ENST00000489979 OR4C45A6NMZ5 311 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 C15orf65H3BRN8 121 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 SLC31A2O15432 143 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 SULT1B1O43704 296 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 GZMHP20718 246 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 GYS2P54840 703 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 SLURP1P55000 103 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 TMED1Q13445 227 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 KCTD20Q7Z5Y7 419 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 C8orf31Q8N9H6 132 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 ALX4Q9H161 411 aaPredicted RBP10.8□□□□□ -0.68
VARS-227ENST00000489979 GFOD1Q9NXC2 390 aa10.8□□□□□ -0.68
VARS-227ENST00000489979 ALMS1Q8TCU4 4167 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 TMEM30CPA0ZSE6 113 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 MAGEA13PA6NCF6 341 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 G3V2T6 193 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 SLC16A6O15403 523 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 IGLV1-40P01703 118 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 POLR2IP36954 125 aaKnown RBP10.79□□□□□ -0.68
VARS-227ENST00000489979 VEGFCP49767 419 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 RAB9AP51151 201 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 ALKBH1Q13686 389 aaKnown RBP10.79□□□□□ -0.68
VARS-227ENST00000489979 RSU1Q15404 277 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 SERPINA12Q8IW75 414 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 OR5D14Q8NGL3 314 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 OR8J1Q8NGP2 316 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 CCDC107Q8WV48 283 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 TNFAIP8L1Q8WVP5 186 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 RFKQ969G6 155 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 GPER1Q99527 375 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 GHITMQ9H3K2 345 aa10.79□□□□□ -0.68
VARS-227ENST00000489979 NKX1-2Q9UD57 310 aaPredicted RBP10.79□□□□□ -0.68
VARS-227ENST00000489979 DAPL1A0PJW8 107 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 FAM90A10PA6NDY2 464 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 LINC01619G3V211 115 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 J3QLW9 94 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 GABRPO00591 440 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 ATP6V0E1O15342 81 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 TXNL1O43396 289 aa10.78□□□□□ -0.68
VARS-227ENST00000489979 HTR3BO95264 441 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms